Gene RPC_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3418 
Symbol 
ID3970462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3806273 
End bp3806671 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID637926529 
Productputative transcriptional regulator 
Protein accessionYP_533277 
Protein GI90424907 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.190487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGC GCGATTTCAA CTGCGGTCCC GGTTGCCCGG TGGAGGTCAC GCTCGACCTG 
ATCGACGGCA AGTGGAAGGG CGTGATCCTG TATCATCTGC AGGAGGGCCG GCTGCGGTTC
GGCGAATTGC GCAAGAAGAT GCCGGGCATC ACCCAGCGGA TGCTGACCAA GCAGCTGCGG
GCCTTGGAAG ACGACGCTCT GGTCACCCGC AAGGTGTTCG CCGAGGTGCC GCCGCGGGTG
GAATATGCGC TGTCGGAGAC CGGGCTGCGG TTGCGGCCGG TGATCGACGC GCTGAGGCGC
TGGGGCGAGG ATCACCAGGC CCGGCAAGCG GCCGGCGCGC AGCCCAGCGC CGCGGCCGAC
GCCGACCATG CCGCGGTCGC GGCGGACCGC AGCCTGTGA
 
Protein sequence
MKRRDFNCGP GCPVEVTLDL IDGKWKGVIL YHLQEGRLRF GELRKKMPGI TQRMLTKQLR 
ALEDDALVTR KVFAEVPPRV EYALSETGLR LRPVIDALRR WGEDHQARQA AGAQPSAAAD
ADHAAVAADR SL