| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3405 |
|---|
| Symbol | |
|---|
| ID | 3970449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3791359 |
|---|
| End bp | 3791898 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_533264 |
|---|
| Protein GI | 90424894 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0242544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.205029 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGGT ATCGCCGAAA TGGCCTTCCT GGCGGCCGCT ATTTCTTCAC CGTGACGCTG
GCGGATCGCC GGTCGACGGT GTTGGTCGAT CGTGTCGCGG AGCTGCGCAC GGCGTTCCGC
GCGGCTCGCC GTGAACGGCC TTTCGCGATC GACGCGATCG TGATCCTGCC GGATCATCTG
CATGCTATCT TCACCCTGCC ATCGGACGAC GCTGACTATT CCGGGCGATG GCGACGCATC
AAGGGGCATT TCAGCAGCGC GTTGATCGCG GCCGGGGTGC GGTTGAAACG CCGGCCGAAC
GGCGATCTCG CGTTGTGGCA AAGCCGTTTC TGGGAGCACA CGATCCGCGA CGAGAACGAT
TTCGCCCAGC ATATCGATTA CGTCCATTTC AACCCGGTCA AGCATGGCTT GGTGCCGCGG
GTGGTCGATT GGCCGCATTC GTCGTTTCAT CGTTACGTGG GGGAGGGGCT ACTGCCGGCA
GACTGGGCCG GCTATGCCCG CGACATCGGC GGCGACTTCG GCGAGCGGTG CGGCGACTAA
|
|---|
| Protein sequence | MVRYRRNGLP GGRYFFTVTL ADRRSTVLVD RVAELRTAFR AARRERPFAI DAIVILPDHL
HAIFTLPSDD ADYSGRWRRI KGHFSSALIA AGVRLKRRPN GDLALWQSRF WEHTIRDEND
FAQHIDYVHF NPVKHGLVPR VVDWPHSSFH RYVGEGLLPA DWAGYARDIG GDFGERCGD
|
|---|
| |