Gene RPC_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3302 
Symbol 
ID3972567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3659702 
End bp3660865 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID637926413 
Productglycosyl transferase, group 1 
Protein accessionYP_533163 
Protein GI90424793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA ATCCCGCAGC ACTCTGCCCC GCCCCGATGC GGATCGCCCT GTTGATTTCC 
GGCACCGGCG TCAACGGCGT CGCGATGCAT TGCCTGCTGC TGGTGCAGTA TCTCTTGAGC
CGCGGCCATC GCGTCTTGCT GCTGCACCGC CCCGGTGCCT GGATCGGCGA CCGGCCCGGC
CTCGAGGGCG CGGAGATATT CGTCACCTCG TTCGGCCGCA GCCCCGGCGA GCTGATCCGG
GTGACCAAGC GGCTGAACGC GTTCCAGCCC GACGTGCTGC ACACTCATAT GAGCAGCGCC
CACACCTACG GCATGCTGGC GCGGATCCTC AGCCGCCGGC CGGTGGTCGC CACCGCGCAC
TCGACCTCGC TGCAACTGCA CTGGTGGTTC AACAACCGGG TGATCGCCAC CTCGCCGGAC
GCCGAGGCGC ACCATATTAA AGTCAACCGG GTGTCGCGCC GGGCGATGCG GATGATTCCG
AGTTTCATCG ACACCCGCTC CTTCCCGGTG ATCGGCGACG ACGAGCGCGT CGCGGCGCGC
GAGGCGCTTG GATTGCCGCA AGACGCCTTC GTGATCGGCT GCGTCGGCGA CATCTGCGAG
CGCAAGCGGC AGATCGACGT GGTGCGCGCG CTTGCCAACG TGCTGAAGGT GGAGCCCCGC
GCCCGGCTGC TGCTGGTCGG CGGTCGTTTC AAGGAATATT TCGACGAACT CAGCAAGGTG
GTCGAAGAGC TCGGCGTGGC GTCGCAACTC ATCACCACCG GCAGCCGCAA CGACGTGCCG
GCGCTGCTGG CCGCGATGGA CGCCTTCGTG CTGGCGTCGC GCAAGGAGTC GAGCCCGCTC
GCAGTCCTTG AGGCGATGTC GCGCGGGCTG CCGGTGATCG CCAGCGACGT CGGCATGTTG
GCGGACTTCG TCACAGAGAA TGTCACCGGC CATGTCGTGA AAGTCGGCGA CGTCGACGCC
ATCAGCCGCC ACCTCATCGC GCTCGCCGCC GACCCCGAAC GCCGCAAAGC GATGGGCGAC
GCCGCGCAGG CCGCCGCGCG CACCAAATAC GATATGAGCG TGCTGGCGCC GCAGACCGAA
GCCGTGCTGC GCGAGGCCGC CGCGATCAAG AACCGGCCGT GGCTCGGCTT CGCCGCCGAA
CTCTGCGGCA CCTCACCATC ATAG
 
Protein sequence
MTVNPAALCP APMRIALLIS GTGVNGVAMH CLLLVQYLLS RGHRVLLLHR PGAWIGDRPG 
LEGAEIFVTS FGRSPGELIR VTKRLNAFQP DVLHTHMSSA HTYGMLARIL SRRPVVATAH
STSLQLHWWF NNRVIATSPD AEAHHIKVNR VSRRAMRMIP SFIDTRSFPV IGDDERVAAR
EALGLPQDAF VIGCVGDICE RKRQIDVVRA LANVLKVEPR ARLLLVGGRF KEYFDELSKV
VEELGVASQL ITTGSRNDVP ALLAAMDAFV LASRKESSPL AVLEAMSRGL PVIASDVGML
ADFVTENVTG HVVKVGDVDA ISRHLIALAA DPERRKAMGD AAQAAARTKY DMSVLAPQTE
AVLREAAAIK NRPWLGFAAE LCGTSPS