Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3252 |
Symbol | |
ID | 3971918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3600571 |
End bp | 3600969 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637926363 |
Product | putative AtsE |
Protein accession | YP_533113 |
Protein GI | 90424743 |
COG category | [N] Cell motility |
COG ID | [COG5622] Protein required for attachment to host cells |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.859314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCA TTCCGCATAA TACGCTGATC GTGGTGGCCG ATGGCGGCGG CGCGATGCTG CTGCGCAATT CCGGCCAGCC CGCCAAGGTG ACGCTGCGCG AGGAGCGTCG GCTGGCGCCG GAGAACCTCG ACGACGACGG CCCGTCGGGA TCGCGCCCCG AGGATCAGAC CCAGAGCCAG ACCGACGAAG CCACCTTCGC CAAGCAACTC TGCAATACGC TGAACCGGAT GAAGCTCGCC GGCGAGTTCG ATCAGCTGGT GCTGATCGCC GACCCGCAAA CGCTCGGCCA GATGCGACCG ATCCTGCACA AGACGGTGGA AGCCTCGGTG ATCCGCTCGC TGGCGAAGGA CCTCACCAAC CACTCGTTCG ACGATATCGC CGCGGCGATC GCGGCGTAG
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Protein sequence | MALIPHNTLI VVADGGGAML LRNSGQPAKV TLREERRLAP ENLDDDGPSG SRPEDQTQSQ TDEATFAKQL CNTLNRMKLA GEFDQLVLIA DPQTLGQMRP ILHKTVEASV IRSLAKDLTN HSFDDIAAAI AA
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