Gene RPC_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3252 
Symbol 
ID3971918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3600571 
End bp3600969 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID637926363 
Productputative AtsE 
Protein accessionYP_533113 
Protein GI90424743 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.859314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA TTCCGCATAA TACGCTGATC GTGGTGGCCG ATGGCGGCGG CGCGATGCTG 
CTGCGCAATT CCGGCCAGCC CGCCAAGGTG ACGCTGCGCG AGGAGCGTCG GCTGGCGCCG
GAGAACCTCG ACGACGACGG CCCGTCGGGA TCGCGCCCCG AGGATCAGAC CCAGAGCCAG
ACCGACGAAG CCACCTTCGC CAAGCAACTC TGCAATACGC TGAACCGGAT GAAGCTCGCC
GGCGAGTTCG ATCAGCTGGT GCTGATCGCC GACCCGCAAA CGCTCGGCCA GATGCGACCG
ATCCTGCACA AGACGGTGGA AGCCTCGGTG ATCCGCTCGC TGGCGAAGGA CCTCACCAAC
CACTCGTTCG ACGATATCGC CGCGGCGATC GCGGCGTAG
 
Protein sequence
MALIPHNTLI VVADGGGAML LRNSGQPAKV TLREERRLAP ENLDDDGPSG SRPEDQTQSQ 
TDEATFAKQL CNTLNRMKLA GEFDQLVLIA DPQTLGQMRP ILHKTVEASV IRSLAKDLTN
HSFDDIAAAI AA