| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3076 |
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| Symbol | |
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| ID | 3972897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3407644 |
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| End bp | 3408648 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926184 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_532937 |
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| Protein GI | 90424567 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.419639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0433353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AGCATAAGGT GCTGGTGACA ACGCGGTTCT TCGACGACGA GGCGGCGGAT
TATCTTCGCC GAGAGGGCTG TACGGTCGTC ACCGCCGGTC TGCCGCATGG GCAGACCGAT
GCCGAGCTGT CGCCGGCGCG CTTGCATGAG TTGCTGGCGG GGGTCAGCGG CTGGATCGTC
GGCGTGGTGC CGGTGACGCG GGAGGTTCTC GCGGCGGCCC CGGCGCTTCA AGTGATCGCG
CGTCGCGGCG TCGGCTACGA CAATGTCGAC GTCGCGGCGG CCAAACAACT CGGCAAGGTC
GTCACGATCG CGCCGGGCGG CAACGAGCCC TCGGTCGCCG ACCACGCGGT GGCGATGATG
CTCGCGGTGG CCAAGCGGTT GCGCGAAACG CACGATCGCA TGGCGGCGGG GGATTGGGTG
CCGCTCAGCG GCACCGAGGT TTATCGCAAG ACCGTCGGGC TGGTCGGCCT CGGACGGATC
GCGCGGGGCG TGGCGCAACG GCTGCGGGGA TTCGAGACCA AGATCCTCGC CTATGACGTC
GCGCCGGACC TCGGCTATGC CGAAAGCCAC GACATCTCGA TCGTCGATCT GCTGACGTTG
TTGTCGCAAA GCGATTACGT CAGCCTGCAC CTGCCGTTGA TGCCGCAGAC CGCACACATG
ATCGATGCGG CTGCGATCGC CCGGATGAAA CCCACGGCGA TCCTGATCAA CACCGCGCGC
GGCGGTCTGA TCGACGAGGC GGCGCTGCTC GCAGCGCTGC AGGATGGCAG GCTCGCGGGC
GCCGGTTTGG ACGTCTTCGA AGCGGAAGCC GACGCCGGCC AACGGCCGAC GGCTGATGCG
TTGCTGCGCC TTCCTAATGT GGTCGCCACG CCGCACGCGG GCGGGGCGAG CAGGGAAGCG
CTGGCGCGCG CCAATCTGAT CGCGGCGCAG ACCGTGATCG ATGTACTCGA TCGCCGCACG
CCTGCGGCCG AGCGCGTGGT GGTCGACGGC CGCTCAGCCG GGTAG
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| Protein sequence | MTTQHKVLVT TRFFDDEAAD YLRREGCTVV TAGLPHGQTD AELSPARLHE LLAGVSGWIV
GVVPVTREVL AAAPALQVIA RRGVGYDNVD VAAAKQLGKV VTIAPGGNEP SVADHAVAMM
LAVAKRLRET HDRMAAGDWV PLSGTEVYRK TVGLVGLGRI ARGVAQRLRG FETKILAYDV
APDLGYAESH DISIVDLLTL LSQSDYVSLH LPLMPQTAHM IDAAAIARMK PTAILINTAR
GGLIDEAALL AALQDGRLAG AGLDVFEAEA DAGQRPTADA LLRLPNVVAT PHAGGASREA
LARANLIAAQ TVIDVLDRRT PAAERVVVDG RSAG
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