Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3039 |
Symbol | |
ID | 3973492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3363189 |
End bp | 3364337 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637926150 |
Product | hypothetical protein |
Protein accession | YP_532903 |
Protein GI | 90424533 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.320364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG CGCGCGGGAG AATGCAAGCA CGCGCAACGC AAAAGCTGCG ACGCATTCGG GCGCTGGTCC GAAAGGAATT CTACCAGATC ATCCGCGACC CGAGCAGCAT GACGATCGGC GTGGTGATGC CGATCTTGAT GGTGCTCCTG TTCGGCTATG GATTGTCGCT CGACGTCCGG AGCGTCCCGA TCGCGGTCGT GGTCGAAGAT TTTTCGCCGG AGACCACCGA ACTGGTATCG TCGTTCCGGT CATCGGCCTA CTTCGACGTC CGGGTCGTCA CATCCCTGCA CCGCGCCACC CAGCTGATAC AGGAACGCAA ACTCGACGGC ATCGTTCGGA TACGCGCTGA CTTCTCACGG CAACTCGCGA TGGGCAACAC CGACTTGCAG GTTCTGGTTC GCGGGACCGA TGCGAATACA GCCCGCATCG TCCGGAACTA TGCCATGGGT GCGATCCGCC GTTGGCAGCT TCACCGCCCT GACTCCGGCG GCGCCCTCCT CCCGCCGGCC GCGACGATCG CAAGCCGAAT GTGGTTCAAC GCGAACAACG ACAGTCGTTA CTATCTCGTT CCAGGCGTGA TCGTATTGAT CGTGACGCTG ATCGGGGCTT TTCTCACCGC CCTGGTCATG GCGCGCGAAT GGGAGCGTGG CACTCTCGAG TCGCTGTTCG TAACGCCGGT GCAACCGGGC GAAATTCTTC TTGGAAAGAC CATTCCATAC TTCATCCTCG GAATGACCGG GCTGTTTCTG TGCATCGGCC TGGCAACCCT ACTATTCGAC GTTCCCCTCC GAGGTTCCTT CTGGATACTG ACACTGGTGT CGATGCTGTA TCTTCTCGTC GCTCTTGGAA TAGGTCTTTG GGTGTCGTCA GCGACCCGAA GCCAGTTCGT CGCGAGCCAG GCGACGCTCC TGCTGACCTT TCTGCCCGCC CTCATGCTCT CCGGATTCTT GTTCGATCTT CGCAGCATGC CGACCGCCGT TCGATGGATC ACCTATCTGT TTCCAGCGCG ATACTATGTG AGTACGCTTC AGACACTCTT CCTTGCGGGA AACGTGTGGA GCATCATTCT GCCAAATGCA CTAGTCCTCG GATCCATCGC GACGGTTCTC CTGATCTTCT CGGCCCGCGC AACACGAAAG ATCCTGTGA
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Protein sequence | MTTARGRMQA RATQKLRRIR ALVRKEFYQI IRDPSSMTIG VVMPILMVLL FGYGLSLDVR SVPIAVVVED FSPETTELVS SFRSSAYFDV RVVTSLHRAT QLIQERKLDG IVRIRADFSR QLAMGNTDLQ VLVRGTDANT ARIVRNYAMG AIRRWQLHRP DSGGALLPPA ATIASRMWFN ANNDSRYYLV PGVIVLIVTL IGAFLTALVM AREWERGTLE SLFVTPVQPG EILLGKTIPY FILGMTGLFL CIGLATLLFD VPLRGSFWIL TLVSMLYLLV ALGIGLWVSS ATRSQFVASQ ATLLLTFLPA LMLSGFLFDL RSMPTAVRWI TYLFPARYYV STLQTLFLAG NVWSIILPNA LVLGSIATVL LIFSARATRK IL
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