Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2965 |
Symbol | |
ID | 3969964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3244430 |
End bp | 3246229 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637926076 |
Product | gamma-glutamyltransferase |
Protein accession | YP_532829 |
Protein GI | 90424459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.939477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG TCGACCCTTC AGCCTTTACG ACGCGTCCGG AAATCGTCGG CACCTTCGGC GTGGTGACGT CGACGCATTG GATCGCCACC GCGGTCGGCA TGTCGATCCT GGAAAAGGGC GGCAACGCGT TCGACGCCGG CTGCGCGGTG GCGTTCGTGC TGCAGGTGGT GGAGCCGCAT CTCAACGGCC CCGGCGGCGA CGTGCCGGTG ATCCTGCACG ACGCCAAACG CGACCGCACC GAAGTGATCT GCGGGCAGGG CACCGCGCCG GCCGGGCTCA GCATCGAACA TTGCCGTTCG CTGGGGCTCG ATCTGGTGCC GGGCACCGGG CTGCTCGCCG CCTGCATTCC CGGCACCTTC GACAGTTGGA TGCTGCTGCT GCGCGACTAC GGCACCATGG ATCTGGTCGA GGTGCTGGCG CCGGCGATTT CCTATGCGCG CCGCGGCCAC CCGCTGGTGG AACGCGCCAG CGCCACCATC GCCACCGTCA AGCAGCTGTT TCTCGAACAC TGGCCGACCT CGGCCGCGGT GTTTCTGCCG AACGGCGAGG TGCCGGCGCC CGGCACGCTA TTCTGCAATC CGACGCTCGC CGACACGTAT CAGCGGATCC TGCAGGAGGC GCTCGCCACC GGCGGCAATC GCACGGTGCA GATCGAGGCT GCGCGAAAGA CCTGGTCCGA AGGGTTTGTC GCCGAGGCGA TCGACAAATT CTGCAAGAGC CCGGTGATGG ACGTCACCGG CCGCCACCAC GCCGGCGTGT TGGCCGGCCA GGACATGGCG AATTGGCAGG CCAGTGTCGA GCAGCCGATC GGCTATGATT ACGGCCGCTA CCGCGTGCTG AAGGCCGGAC CCTGGACCCA AGGGCTGGTG GCGCTGCAGC AACTGGCGAT CCTGAAGGGC TTCGATCTCG ACAAGCTCAG CCCGGTCGAT CCGGAATTCA TCCATCTGGT GGTCGAGGCG TCGAAGTTGG CGTTCGCCGA TCGCGAGGCG TTCTACGGCG ATCCGAAGTT CGCCGAGGTG CCGGTCGAGA TTCTGCTGTC GGATGCTTAC AACGCGGTGC GTCGGACGCA GATCGGCGAA ACGGCTTCAA TGGAATTGCG GCCGGGCAGC ATCGACGGCT TCTCCGGCAA GGTCGATGCG CGGGTGTCGA GCGGCGCGCG AGTCGCCGTC GGCGCTTCGG GCGCCGGCGA GCCGACGGTC GGGCGGATGG GCAATGTGCG CGGCGACACC GTGCATTTCG ACATCATCGA CAAGGACGGC AATATGATTG CCGCCACGCC CTCCGGCGGC TGGCTGCAGA GTTCGCCGGT CATTCCCGAA CTCGGCTTCG CGCTCGGCAC CAGGGCGCAA ATGTTCTGGC TCGACGAAAG CCATCCAGCC TCGCTGGTGC CTGGCAAGCG GCCGCGCTCG ACGCTGTCGC CGACCATGGC GCTGCGCGAC GGCAAGCCGT ATCTGGCCTG GGGCTCGCCC GGCGGCGATC AGCAGGACCA ATGGATCCCG CAGTTCTTCC TGCGCCACGT CCATGCCGGC ATGAACCTGC AGGAAGCGAT CGACGCGCCG GCCTGGCACA GCGAGCATTT CCCGGCGTCG TTCTGGCCGC GGCAATCGCG ACCGGGCGTG CTGGTGGTGG AAAATCGGCT GCCGCCCGCA ACCATCGAAG AGTTGCGCCG CCGCGGCCAC ATCGTCGAAG TCGGCGAGGA GTGGTCGGAA GGCCGCCTGG TATCAGCCGC GCTTGATGGC GATTATCGTC GCGCCGCCGC CAATCCGCGC GGCATGCAGG CCTACGCCGC CGGACGATAG
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Protein sequence | MSFVDPSAFT TRPEIVGTFG VVTSTHWIAT AVGMSILEKG GNAFDAGCAV AFVLQVVEPH LNGPGGDVPV ILHDAKRDRT EVICGQGTAP AGLSIEHCRS LGLDLVPGTG LLAACIPGTF DSWMLLLRDY GTMDLVEVLA PAISYARRGH PLVERASATI ATVKQLFLEH WPTSAAVFLP NGEVPAPGTL FCNPTLADTY QRILQEALAT GGNRTVQIEA ARKTWSEGFV AEAIDKFCKS PVMDVTGRHH AGVLAGQDMA NWQASVEQPI GYDYGRYRVL KAGPWTQGLV ALQQLAILKG FDLDKLSPVD PEFIHLVVEA SKLAFADREA FYGDPKFAEV PVEILLSDAY NAVRRTQIGE TASMELRPGS IDGFSGKVDA RVSSGARVAV GASGAGEPTV GRMGNVRGDT VHFDIIDKDG NMIAATPSGG WLQSSPVIPE LGFALGTRAQ MFWLDESHPA SLVPGKRPRS TLSPTMALRD GKPYLAWGSP GGDQQDQWIP QFFLRHVHAG MNLQEAIDAP AWHSEHFPAS FWPRQSRPGV LVVENRLPPA TIEELRRRGH IVEVGEEWSE GRLVSAALDG DYRRAAANPR GMQAYAAGR
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