| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2921 |
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| Symbol | |
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| ID | 3970015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3185559 |
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| End bp | 3187340 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926033 |
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| Product | hemolysin activation/secretion protein |
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| Protein accession | YP_532787 |
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| Protein GI | 90424417 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.502908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGATC GTAGTCGGTA CAAGGATCGC GGGCCATCGT CCGCGTGCTG GGCTTTGCTT
TGCCTGAAGA CGGCCGTTGT GACGCTGGCG GCCAGCGCTG CGGTGTCATC GCCGGCATTC
GCGGCAAAAC AGACGCGCGC GGATCGCTCG TCCGCGGCAA ACACGGCTGC ATCGAACGAG
GCTGCGCGGC CTGCAGCGCT CTCGAATGCG CAGGCCGGAA CCGAAACGCT GCCGCAAACA
CCCGCATCCA CACAGCGCTT CGATATCGAT GATTTTGCCA TCCAGGGCGC CGACAAGCTT
CCGCAAATCG AAATCGAAGA AGCGATCTAT CCGTTCCTGG GACCAAACAG GGGCGTGGAG
GATGTCGAGA AGGCCCGCGC CGCGCTGGAG AAAGCCTATC ACGACCGCGG CTATCAGACT
GTCAGCGTCT CGGTGCCGGA GCAGAACGCC CAGCGCAAGG TCGTCACACT GAAAGTCACC
GAACTGAAGG TCGGGCGGCT GCGCGTGAAG AACTCGCGCT ACTTCGACAT CGACAAGATC
AAGAATCGCG CGGGCTCTCT GAAAGAGGGC GCGCTGCCGA ATTTCAATGA CGTGACAAAA
GACGTCGTGG CGTTGAACCA GTGGTCGGAC CGGCGGGTAA CGCCGGCGCT GCGTGCGGGC
GTCACGCCCG GTACCGTTGA CGTCGATCTC AATGTGGAAG ACACCGCGCC AATTCACGCC
AGCGCCGAAT ACAACAACCG GCAATCACCC AACACGACGG CGACGCGGTT CAACGCGACG
GTCCATTACG ACAATCTGTG GCAGCTCGGC CATTCGCTGA GCTTCAGCTA TCAAGTCGCG
CCGGAGCGGA ACACGGACGC CGAGGTGTTT TCCGGCTCCT ATCTGGCGCG CGTGCCGAAC
GTCGATTGGT TGAACGTTCT CGTCTACGCG GTGAAATCCA GCAGCAGTGT TGCGACCGTC
GGCGGCATGA ATGTCGTCGG CCCCGGACAG ATCTTCGGCG GTCGCGCGGT GATGACGCTA
CCGGCGCGGG AGAACTTCTT CCATACGCTG TCGGCGGGTC TCGACTACAA ACACTTCGAC
CAGACCGTGA TGCTCGGCCG CGACGGTTTC TCCTCGCCGG TGACGTATTA CCCAGTGGTC
GCAAGCTATG GCGCGACGTT TCAGAACGCG AACTTCACGA CCCAGCTCAA CGCGTCGGTG
ACCTACAACC TGCGGCCGAT CAGCAGCGCG TGGGATGAGT TCGACGCAAA GCGCTACAAG
GCGTCACCGA GCTTCACGCA CTACAATCTC GATGTGTCGC ACACCCATGA ACTGGGTGAG
GGGTTTCAGC TTTACGGCAA AGCGCAGGGC CAGATCTCCG ATGGGCCGCT GGTCTCCTCC
GAGCAGCTCA GCATCGGCGG CCTCGATACC GTGCGCGGCT ATCTCGAATC GGAGGTGCTG
GGCGACAACG GCGTGGTCGG CAATCTGGAA TTGCGCAGTC CAAATATCGG CGAATGGCTG
CAGAAGCACG TCAAGGACGA GACCGGGCAG GGGCCGTCGC GCTTCACCAC CTTCAACGAT
TGGCGGGTCT TTGGCTTCGC CGATGGCGGT CACGCGACCG TGCTGACCTC GCTTCCAGAA
CAGCGGGCGC AATTCGATGT CTGGAGCTAC GGCGTCGGCA CCCGCTTCAA GGTGTTCAAT
TACGTCAACG GCATGATCGC CTATTCGGTG CCGATGGTCA GCCAAGCCTT CACGCAGGCG
AACGATCCGC GTGTGAATTT CCGCATTTGG GGTGAGTTCT GA
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| Protein sequence | MQDRSRYKDR GPSSACWALL CLKTAVVTLA ASAAVSSPAF AAKQTRADRS SAANTAASNE
AARPAALSNA QAGTETLPQT PASTQRFDID DFAIQGADKL PQIEIEEAIY PFLGPNRGVE
DVEKARAALE KAYHDRGYQT VSVSVPEQNA QRKVVTLKVT ELKVGRLRVK NSRYFDIDKI
KNRAGSLKEG ALPNFNDVTK DVVALNQWSD RRVTPALRAG VTPGTVDVDL NVEDTAPIHA
SAEYNNRQSP NTTATRFNAT VHYDNLWQLG HSLSFSYQVA PERNTDAEVF SGSYLARVPN
VDWLNVLVYA VKSSSSVATV GGMNVVGPGQ IFGGRAVMTL PARENFFHTL SAGLDYKHFD
QTVMLGRDGF SSPVTYYPVV ASYGATFQNA NFTTQLNASV TYNLRPISSA WDEFDAKRYK
ASPSFTHYNL DVSHTHELGE GFQLYGKAQG QISDGPLVSS EQLSIGGLDT VRGYLESEVL
GDNGVVGNLE LRSPNIGEWL QKHVKDETGQ GPSRFTTFND WRVFGFADGG HATVLTSLPE
QRAQFDVWSY GVGTRFKVFN YVNGMIAYSV PMVSQAFTQA NDPRVNFRIW GEF
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