Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2919 |
Symbol | |
ID | 3970013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3183107 |
End bp | 3183511 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637926031 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_532785 |
Protein GI | 90424415 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0661927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCC AGAGCGACGC CAAACCATAC GACGACATCA ATATTACGCC GATGCTGGAT CTCGCTTACG TGCTGCTGGT GATCTTTATC ATCATGACGA CGGCGACGGT GCAGGGCCAG AAGGTCAATT TGCCGAAAGC CTCCGCCGCG CCAAGTCTGG CCACGCAGAC CACGAAGGCG ATCACCGTCG CCAACGACGG CAAGATCTTT CTCGACACGA TTCCGGTGAC GTTGCCGGAA CTCGAGCAGC GCCTGGTGCA GCAAAAAGCG CTGACCCCGG AGTTCCCGGT GGTGCTGCGC GGCGATTCGG CCGCGCAATA CCAGAACGTA ATGGACGTGC TCGATTTGCT CGGCCGCATC GGCCTCACTC AGGTCGGTCT CGCAACCAAA CCACTGGTGA AGTGA
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Protein sequence | MQIQSDAKPY DDINITPMLD LAYVLLVIFI IMTTATVQGQ KVNLPKASAA PSLATQTTKA ITVANDGKIF LDTIPVTLPE LEQRLVQQKA LTPEFPVVLR GDSAAQYQNV MDVLDLLGRI GLTQVGLATK PLVK
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