Gene RPC_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2919 
Symbol 
ID3970013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3183107 
End bp3183511 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content59% 
IMG OID637926031 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_532785 
Protein GI90424415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0661927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC AGAGCGACGC CAAACCATAC GACGACATCA ATATTACGCC GATGCTGGAT 
CTCGCTTACG TGCTGCTGGT GATCTTTATC ATCATGACGA CGGCGACGGT GCAGGGCCAG
AAGGTCAATT TGCCGAAAGC CTCCGCCGCG CCAAGTCTGG CCACGCAGAC CACGAAGGCG
ATCACCGTCG CCAACGACGG CAAGATCTTT CTCGACACGA TTCCGGTGAC GTTGCCGGAA
CTCGAGCAGC GCCTGGTGCA GCAAAAAGCG CTGACCCCGG AGTTCCCGGT GGTGCTGCGC
GGCGATTCGG CCGCGCAATA CCAGAACGTA ATGGACGTGC TCGATTTGCT CGGCCGCATC
GGCCTCACTC AGGTCGGTCT CGCAACCAAA CCACTGGTGA AGTGA
 
Protein sequence
MQIQSDAKPY DDINITPMLD LAYVLLVIFI IMTTATVQGQ KVNLPKASAA PSLATQTTKA 
ITVANDGKIF LDTIPVTLPE LEQRLVQQKA LTPEFPVVLR GDSAAQYQNV MDVLDLLGRI
GLTQVGLATK PLVK