| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2869 |
|---|
| Symbol | |
|---|
| ID | 3970058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3121354 |
|---|
| End bp | 3122709 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637925981 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_532736 |
|---|
| Protein GI | 90424366 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.22869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA AAATCCTGAT AGCCAATCGC GGCGAGATCG CGCTGCGCGT GTTGCGGGCC
TGCAAGGAGC TCGGCATCGC CACCGTCGCG GTGCACTCCA CCGCCGATGC CGACGCCATG
CATGTCCGGC TCGCCGACGA GAGCGTCTGC ATCGGGCCGC CGCCGTCCAA GGACAGCTAC
CTCAACATCC CGGCGCTGCT CGCCGCCTGC GAGATCACCG GCGCCGACGC GGTGCATCCC
GGCTACGGCT TTCTGTCGGA GAACGCCCGC TTCGCCGAGA TCCTGGCCGA GCACAATCTG
CATTTCATCG GCCCGAAATC CGAACACATC CGACTGATGG GCGACAAGAT CGAGGCCAAG
AAGACCGCGC GCCGGCTCGG CATTCCGGTG GTGCCGGGCT CCGAGGGCGC GGTCGGCCCC
GAGGACGACG CCATGGCGAT CGCCAAGGCG ATCGGGTTTC CGGTGCTGGT CAAGGCCGCC
TCGGGCGGCG GCGGCCGCGG CATGAAGGTG GCGCAGACCG AAGCCGACCT GATGCTGGCG
CTGTCGACCG CCGGCAACGA GGCCAAGTCG GCGTTCGGCG ACGCCTCGGT CTATCTGGAA
AAATATCTGC AGAAGCCGCG CCACATCGAG ATCCAGGTGC TCGGCGACGG CCGCGGCGGC
GCCATTCATC TCGGCGAGCG CGACTGCTCG CTGCAGCGCC GCCACCAGAA GGTCTGGGAG
GAAGGCCCCT CGCCGGTGCT CAGCGCCGAG GCCCGCGCCA AGATCGGCGC GACCTGCGCC
AAGGCGATGC AGGACATGCA GTATCTCGGC GTCGGCACCA TCGAATTCCT CTACGAAGAC
GGCGAGTTCT ACTTCATCGA GATGAACACC CGAATCCAGG TCGAGCATCC GGTCACCGAG
ATGATCACCG GCATCGACCT CGTGCTGGAG CAAATCCGGG TCGCCGCCGG CGGCGACTTG
CCCTGCACCC AGGACGAGAT CGTGCTCAAC GGCCACGCCA TCGAATGCCG GGTCAATGCC
GAGAACCCGG TGACCTTCCG GCCCTCGCCG GGCCGGATCG TGCGCTACCA CCCGCCGGGC
GGGCTCGGGG TGCGGATCGA TTCCGCCGCC TACCAGGACT ATGTGATTCC GCCCTATTAC
GATTCGATGG TCGGCAAGCT GATCGTGCAC GGCAAGACCC GGGCGGAATG CCTGATGCGG
CTGCGCCGCG CGCTCGACGA AATGGTGGTC GACGGCATCG AAACTACGCT GCCGTTGTTC
CGCGCGCTGG TGCGGGAGCC CGGCATCATC GACGGCGATT ACCATATCCA TTGGCTGGAG
CATTATCTGG CGGCGGGCGA CACCAAAAAG CCCTGA
|
|---|
| Protein sequence | MFDKILIANR GEIALRVLRA CKELGIATVA VHSTADADAM HVRLADESVC IGPPPSKDSY
LNIPALLAAC EITGADAVHP GYGFLSENAR FAEILAEHNL HFIGPKSEHI RLMGDKIEAK
KTARRLGIPV VPGSEGAVGP EDDAMAIAKA IGFPVLVKAA SGGGGRGMKV AQTEADLMLA
LSTAGNEAKS AFGDASVYLE KYLQKPRHIE IQVLGDGRGG AIHLGERDCS LQRRHQKVWE
EGPSPVLSAE ARAKIGATCA KAMQDMQYLG VGTIEFLYED GEFYFIEMNT RIQVEHPVTE
MITGIDLVLE QIRVAAGGDL PCTQDEIVLN GHAIECRVNA ENPVTFRPSP GRIVRYHPPG
GLGVRIDSAA YQDYVIPPYY DSMVGKLIVH GKTRAECLMR LRRALDEMVV DGIETTLPLF
RALVREPGII DGDYHIHWLE HYLAAGDTKK P
|
|---|
| |