| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2852 |
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| Symbol | |
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| ID | 3970080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3099604 |
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| End bp | 3102096 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925964 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_532719 |
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| Protein GI | 90424349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.456684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC TGTTTCGGTT TATGGGCTTC CTGTTCGCGG CCGGAACCAT CGTGTTCCTG
GTCGGCGTGG CCGCGGCCGC CGGGCTGATC TGGCATTACT CCAAGGACTT GCCGGACTAT
TCGCAGCTGC AGGATTATGA GCCGCCGGTG ATGACCAGGG TGCACGCCGC GGACGGCGCG
CTGCTCGGCG AATATTCCAA GGAACGACGG CTGTATCTGC CGATACAGGC GGTGCCGAAA
ATGGTGATCA ACGCCTTCCT CGCCGCCGAA GACAAGAACT TCTACGAGCA CGGCGGCATC
GACTATTCCG GCATGGCGCG CGCGGCGATT CTCTACGCGC AGAATTTCGG CTCCAACCGC
AGGCCGCAGG GTGCCTCCAC TATCACCCAG CAGGTCGCCA AGAACTTCCT TTTGACCAAC
GAGGTGTCGT TCACCCGCAA GATCAAGGAA GCCTTGCTGG CGATGCGCAT CGAGCGCGCC
TATTCCAAGG ACAAGATCCT CGAACTGTAT CTCAACGAAA TCTATCTCGG GCTCGGCGCC
TACGGCGTCG CCGCGGCTTC GCTGGTGTAT TTCGACAAGT CGGTCAACGA ACTGACGGTG
GCCGAGGCGG CCTATCTGGC GGCGCTGCCG AAGGCGCCGG CGGCGCTGCA TCCGATCCGC
AACCGCGACC GCGCCATCGA GCGGCGCAAT TACGTGATCG ATCGGCTGCT GGAGAACGGC
TGGATCAAGC AGGCCGATGC CGACAAGGCG CGCAAGGACC CGATGGCGGT GACCAACCGC
ACCAACGCCG CGCACATCTT CGCCGGCGAA TATTTCGCCG AGGAGGTCCG CCGCGACGTG
TTCGAGCGCT ACGGCGAGAA GAAGCTTTAT GAAGGCGGGC TGTCGGTGCG CACCACGCTC
GATCCGAAGC TGCAGGTGAT CGCGCGCAAG ACCATGAGCG CCGGCCTCGT CACCTTCGAC
GAGGCGCAGG GCTGGCGCGG CGCCACCGCC AAACTCGACA TCTCGGGCGA CTGGGGCGTC
AAGCTCGCCG ACGTCAAGTC GCTGTCGGAT ATTTCGCCGT GGCGGATGGC GGTGGTGCTG
GAGACCTCCG ATCAATCGGC GCGCATCGGA TTCCAACCGG GCCGCGAACT CGGCGGCGCG
GTGCTGAAGG ATCGCCAGAT CGGCATCATC ACGCTCGACG GGGTGAAATG GGCGAGGGCG
GCCTCCGGGC CGCAGCGCGG TCGCACGCCC ACCTCGGTGT CGCAGGTGCT GTCGCCGGGC
GACATCATCT ATGCCGACCC GTTGATCGCC AAGGACGGCA GCCTGGTCGA AGGCCAGTTC
CGGCTGCGGC AATTGCCCGA AGTGTCCGGC GCCATGGTGG CGATGGACCC GTGGACCGGC
CGGGTACTGG CGATGGTCGG CGGCTTCTCG TTCGACCAGA GCCAGTTCAA CCGCGCGACG
CAGGCCTATC GGCAGCCCGG CTCGTCGTTC AAGCCGCTGG TCTATTCGGC GGCGATGGAC
AACGGCTATA CGCCGTCCAC CGTGGTGGTC GACGCGCCGA TCGAAATCGA CCAGGGCCAG
GGCGCCGGGG TGTGGCGTCC GGAGAACTAT TCGACCGGCA AATATTACGG TCCGACCACG
CTGCGCAACG CGCTGAAGCA CTCGCTCAAT ACCGTGACGG TGCGGCTGGC GCAGGACGTC
GGCATGCCGC TGATCGGCGA ATACGCCAAG CGGTTCGGGG TCTACGACGA ACTGCCGAAC
TATCTGTCCT ATGCGCTCGG CGCCGGCGAA ACCACGGTGA TGCGGATGGT GACGGCCTAT
TCGATGTTCG CCAATGGCGG GCGCCGGGTG AAGTCGACGC TGATCGACCG CATCCAGGAT
CGCTACGGCC GCACCATCTT CAAGCACGAC GCCCGCGAAT GCCGCGGTTG CGACGCGCCC
GAGGGATGGA AGAACCAGCC CGAGCCGCAA CTGGTCGATC GCCGCGAACA GGTGCTCGAC
GCCATGACCG CCTACCAGAT CACCTCGATG ATGGAAGGCG TGGTGCAGGG CGGCACCGCG
ACCATCATGC GCGAAGTCGG CAAGCCGATC GCCGGCAAGA CCGGCACCAC CAACGACGAG
AAGGACGCCT GGTTCATCGG CTTCTCACCG GACCTCGTGG TCGGGATCTA TGTCGGCTAC
GACAAGCCGC GCAACCTCGG CCGCGGCGGT ACCGGCGGCC ATCTCGCCGC GCCGGTCGCC
AAGGAGTTCA TGAAGCTCGC TCTGGCCGAC AAGCCGGCGA TTCCGTTCCG CATTCCGGCC
GGAATCAAAT TGATCCGGGT CGACTCCAAG ACCGGCACCC GCGCCGGACC CGGCGACGGC
GGCCGCACCA TCCTGGAAGC CTTCAAGCCC GGCACCGCGC CGCCGGACAA TTACTCGGTG
ATCGGCGTCG CCGATGCCGA AGGCCGTTCG CTGACCGTAT CGCCCGACGC CGACCGCTCG
ATCCTGCGCC CCGGCACCGG CGGGCTCTAC TAG
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| Protein sequence | MRLLFRFMGF LFAAGTIVFL VGVAAAAGLI WHYSKDLPDY SQLQDYEPPV MTRVHAADGA
LLGEYSKERR LYLPIQAVPK MVINAFLAAE DKNFYEHGGI DYSGMARAAI LYAQNFGSNR
RPQGASTITQ QVAKNFLLTN EVSFTRKIKE ALLAMRIERA YSKDKILELY LNEIYLGLGA
YGVAAASLVY FDKSVNELTV AEAAYLAALP KAPAALHPIR NRDRAIERRN YVIDRLLENG
WIKQADADKA RKDPMAVTNR TNAAHIFAGE YFAEEVRRDV FERYGEKKLY EGGLSVRTTL
DPKLQVIARK TMSAGLVTFD EAQGWRGATA KLDISGDWGV KLADVKSLSD ISPWRMAVVL
ETSDQSARIG FQPGRELGGA VLKDRQIGII TLDGVKWARA ASGPQRGRTP TSVSQVLSPG
DIIYADPLIA KDGSLVEGQF RLRQLPEVSG AMVAMDPWTG RVLAMVGGFS FDQSQFNRAT
QAYRQPGSSF KPLVYSAAMD NGYTPSTVVV DAPIEIDQGQ GAGVWRPENY STGKYYGPTT
LRNALKHSLN TVTVRLAQDV GMPLIGEYAK RFGVYDELPN YLSYALGAGE TTVMRMVTAY
SMFANGGRRV KSTLIDRIQD RYGRTIFKHD ARECRGCDAP EGWKNQPEPQ LVDRREQVLD
AMTAYQITSM MEGVVQGGTA TIMREVGKPI AGKTGTTNDE KDAWFIGFSP DLVVGIYVGY
DKPRNLGRGG TGGHLAAPVA KEFMKLALAD KPAIPFRIPA GIKLIRVDSK TGTRAGPGDG
GRTILEAFKP GTAPPDNYSV IGVADAEGRS LTVSPDADRS ILRPGTGGLY
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