| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2834 |
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| Symbol | |
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| ID | 3970062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3076008 |
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| End bp | 3077075 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925946 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_532701 |
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| Protein GI | 90424331 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.15225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGCAC CCAGGGACGA GCACGAACGC ACCATGGCCT ATGCCGAGGT GGCGTTGCGT
CAGATCAGAT CGTTGCGGCA GGATGCGCTG CCGCGCAACT ACGAGATCTG GTACGTCTAT
GCGACCGGGC ACAATGCCCC GCTCAACAAG ATCATCAACG AAACGCTGGC GCGCAGCGGC
AAGCTGAGCG AGTCCGACCT CGAACAGATC TACGACACCT ATTTGTCGCA TGGTCGTACC
ACCGACCGCA TCGACAAGAT CGGCGCCCGC GTCGTCAGTG AAATCGAGGA CGTGATGTCG
CTGATCACCG ACGCGCTCGG CTTGACCGCG AGTTTCGGCG ACAATCTCAG CGGCGCCAAT
CAGAAGCTGT CGCTCGCCAA GGATCGCGCC CAGGTCAAGG CGGTGGTCGA ACGGCTGGTG
GCCTCGACCC GGGAAATGCA GCAGGCCAAC AACGCGCTGG AGACCCGGCT GTCGACCTCG
AAGCTCGAGA TCAACAATTT GCAGCACAAT CTCGAGGCGA TCCGCGCCGA AAGCCTCACC
GATCCCTTGA CCGGTCTCGG CAACCGCAAG CACTTCGACC GCGCGGTCGA CGACGCCGTG
CGCTGCGCCT CGGCGAGCCG GCAACCGCTG GCGCTGCTGA TGATCGACAT CGATCACTTC
AAGTCGTTCA ACGACACCTA TGGCCACCTC ACCGGCGACC AGGTGCTGCG GCTGGTCGGC
ATGTCGCTGA AGCAGAGCAT CAACGGCCAG GATATCATGG CCCGTTACGG CGGCGAGGAA
TTCGCCGTGG TGCTGCCCAA CACCGGGCTG CGGCAGGCGA TCGCGGTCGC GGAGAACATC
CGCCAGACCG TGACCTCCAA GGAACTGAAG AAGAAGTCCA CCGGGGAAAT TCTCGGCCGC
GTCACCATCT CGGTCGGAGT GTCGACGCTG CGAGCCGACG ACGATACCGA CTCGCTGATC
GAGCGCGCCG ACAGCTGCCT CTACGCCGCC AAGCGCAACG GCCGCAACCG AGTGATCTGC
GAAATCGACC GCGACGACCT CGACCACGAC CGCATCCAGG TGGCGTGA
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| Protein sequence | MIAPRDEHER TMAYAEVALR QIRSLRQDAL PRNYEIWYVY ATGHNAPLNK IINETLARSG
KLSESDLEQI YDTYLSHGRT TDRIDKIGAR VVSEIEDVMS LITDALGLTA SFGDNLSGAN
QKLSLAKDRA QVKAVVERLV ASTREMQQAN NALETRLSTS KLEINNLQHN LEAIRAESLT
DPLTGLGNRK HFDRAVDDAV RCASASRQPL ALLMIDIDHF KSFNDTYGHL TGDQVLRLVG
MSLKQSINGQ DIMARYGGEE FAVVLPNTGL RQAIAVAENI RQTVTSKELK KKSTGEILGR
VTISVGVSTL RADDDTDSLI ERADSCLYAA KRNGRNRVIC EIDRDDLDHD RIQVA
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