Gene RPC_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2823 
Symbol 
ID3970090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3064961 
End bp3066016 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID637925935 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_532690 
Protein GI90424320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.20351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA AGAAGATCGG CATCCTCGGC GCCTCCGGCT ACACCGGCGC GGAACTGGTG 
CGGCTGTTGC TGCGCCATCC CAAGGTGGAG TTGGTGCTGT TGACCGCCGA CCGCCGCGCC
GGCCAAGCGA TGGGCGACGT GTTCCCGCAA TTTGCGCCCT ACGAGCTGCC GCAACTGGTG
GCGATCGACG GCGTCGATTG GGCGGCATTG GCGCTCGATC TGGTGTTCTG CGCGCTGCCG
CACGCCACCA CGCAAGTGGT GCTGAAGGAT CTGCTGGCCA AAGCGCCGGA GACCAAGGTG
GTGGACCTGT CGGCCGATTT TCGGCTCGAC GATGCCGCGG CCTATGCCAA ATGGTACGGC
CACGAGCACC AGGCGCTGGA GCTGCAGCAG GAGGCGGTGT ACGGCCTGGT GGAAGTCTAT
CGCCGCGACA TCAAGAAGGC GCGGCTGGTC GCCAATCCCG GCTGCTACAC GTCGTGTGCG
CAATTGCCGC TGGTGCCGCT GTTGAAGGCG AAAGCGATCG AGCCCGACGA GATCGTGATC
GACGCCAAAT CCGGCATGAC CGGCGCCGGC CGCGCCGCCA AGGAAGCCAT GCTGTTCTCG
GAAGTCTCCG AGGGATTCAA CGCTTACGGC GTCGGTCATC ATCGCCACAT GGCCGAGCTC
GACCAGGAAT TCGCCAAGGC CGCCGGCAAG CCGGTGGTGG TGTCGTTCAC GCCGCATCTG
TTGCCGATCA ATCGCGGCAT CCTGTCGACG ATCTATGTGC GCGGCCGGCG CGGCAAGACC
GCGCAGGAGC TGCACGCGAT CCTGGTTGAG GCCTATGCCA AGGAGCCGTT CGTGCACGTG
CTGCCGTTCG GCCAGACGCC GCATACGCGA CACGTGCGCG GCTCCAACAT GACCATGATC
GGGGTCGCCG CCGACCGCAT CGAGGGCCGC GCCATCATTG TCGCGGTGCT CGACAATCTC
ACCAAGGGCG CCTCGGGGCA GGCGGTGCAG AACATGAACC TGATGCTGGG CTTCGTGGAG
TCGACCGGGA TCGATCAGCC GGCGATGTTC CCATGA
 
Protein sequence
MSKKKIGILG ASGYTGAELV RLLLRHPKVE LVLLTADRRA GQAMGDVFPQ FAPYELPQLV 
AIDGVDWAAL ALDLVFCALP HATTQVVLKD LLAKAPETKV VDLSADFRLD DAAAYAKWYG
HEHQALELQQ EAVYGLVEVY RRDIKKARLV ANPGCYTSCA QLPLVPLLKA KAIEPDEIVI
DAKSGMTGAG RAAKEAMLFS EVSEGFNAYG VGHHRHMAEL DQEFAKAAGK PVVVSFTPHL
LPINRGILST IYVRGRRGKT AQELHAILVE AYAKEPFVHV LPFGQTPHTR HVRGSNMTMI
GVAADRIEGR AIIVAVLDNL TKGASGQAVQ NMNLMLGFVE STGIDQPAMF P