| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2788 |
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| Symbol | |
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| ID | 3970128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3027058 |
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| End bp | 3028794 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925898 |
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| Product | hypothetical protein |
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| Protein accession | YP_532655 |
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| Protein GI | 90424285 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0959536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.707292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA GTCTGCATCT GTCGGGGATG ACCGCAACGG CGGTGGTGTT GGGATCGTCC
TGGGCGATCG CGGCCGATCT GCCGGTCAAG GCGGTGGCGC CGCCGCCTGA GCTGTCGGCC
TGGGAAACCC AGATCGGCGC GCGCTGGTGG TACTCGTCCG GCAAGGTGCA AAAGGATCTG
TTCGGCACGA ACAACACGCC GGGCGTGTCG CTGGCGGTGT CGCGGCTGAT CTACGACAAT
CTCACCGGCC ATTCCGGCGA GCTGTTCGGA CGGGTCGATC ACACCACAGG CCTGTTCTTC
AAATTCAATG CCGGGCTCGG CTCGATGGGC AGCCACGGCA AGTTGAACGA CGAAGACTTC
GATCCATCGG CGATGGGTGG TTCGGGCTAT TCCAACACCC TCAGCACGTT GCGCGACGGC
AACCTGTCTT ACGCCACTGC CGACGTCGGC TACAGCTTCG TCACTGCGCC GGGCGCCAAG
CTCGGCGCCT TCGTCGGCTA CAATCATTTC TTCACCCAGG AGAACGCCTA CGACTGCGTG
CAGCAGGCCG CCAATCAGTT CGTCAACGGC TGCGGCGTCA ATACGCGCGC GATCACGGAA
TCCAACCATT GGCAGTCGCT GCGGGTCGGT CTGTCGGGCG AATTCGCGGT GTCCGAGCGG
CTGAAGCTGA GCGTCGACGC GGCCTATCTG CCCTATGTCT CGTTCCGCGG CGTCGACGAC
CACGTGCTGC GCAGCCTGCG GATCGACGAG ATCGGCGATA ACGGCAATGG CGCGCAGATC
GAGTCGGTGC TGTCTTACGC CGTCACCGAC GGCTGGAGCC TCGGTCTCGG CGGCCGTTAT
TGGACGTTCA AGAGCAACGA CACCAGCGCG CGCTTTCAGC AGCTGCCGAG GGCGCCCGAC
GCCTCCACCC AACGCACCAC CTTCACCGCC GAGCGCTACG GCATGTTCCT GCAATCGTCC
TACAAGTGGG GCGACACCAC GCCGCCGTCG GCCGCCGTCG GGTTCGCCAC CAAGGCGCCG
CCGCTGGCGG TGAACTGGAC CGGCGTCTAT GTCGGCGGCC AGCTCGGCGC CGGCTTCGGT
CCGAAACACT GGTCCGATTC AATCGGCTCG ACCACGTCGC TGGTCAATCC GGGGTCGGAT
TTCCCGGCGG GCACGCCGCC CGGATTGAAC GTCGGCGGTT TCGGCAAATC GACGCCGATG
GCCGGCGGGC TTGGCGGGGC GCAACTCGGC TACAATTTCC AGACCGGCCG AACGGTGCTC
GGCGTCGAGG CCGACGTGGC GTTTGCCGAT CTCAAGGGCT CGCATACGAT CTATTCCGGA
CTCGGCGGCG GCCAGGCCGA GGCGCACACC ACGGCGCTGG GCAGCGTCAC CGGGCGCGTC
GGTTACGCGG TCGAGCGCAA CCTGCTCTAC GTCAAGGCCG GCGGCGCCTG GGCGGTCACC
GACCACACCC TCGACACCAG CAGTATTTTC ATTCCATCGC AGGGCGAGGG CTGCTGTCAT
GACAACGTGC GCAGCACGCG GCTCGGCTGG ACCGTCGGTG CCGGCCTCGA ATACGCCGTC
GATCGTCATT GGTCGGCGAA GCTCGAATAC GATTACATGG ATTTCGGCAG CCAAAGCGTC
AGCTTCCCGG TCAATGCCAG GCTCGGTCTG CCGAGTGTCG ACATCGACCA GGCGTTCCAC
GTGGTCAAGA TGGGCGTGAA CTACAAGCTC GATTGGGGCG TCGTGGCCAG CAACTGA
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| Protein sequence | MKISLHLSGM TATAVVLGSS WAIAADLPVK AVAPPPELSA WETQIGARWW YSSGKVQKDL
FGTNNTPGVS LAVSRLIYDN LTGHSGELFG RVDHTTGLFF KFNAGLGSMG SHGKLNDEDF
DPSAMGGSGY SNTLSTLRDG NLSYATADVG YSFVTAPGAK LGAFVGYNHF FTQENAYDCV
QQAANQFVNG CGVNTRAITE SNHWQSLRVG LSGEFAVSER LKLSVDAAYL PYVSFRGVDD
HVLRSLRIDE IGDNGNGAQI ESVLSYAVTD GWSLGLGGRY WTFKSNDTSA RFQQLPRAPD
ASTQRTTFTA ERYGMFLQSS YKWGDTTPPS AAVGFATKAP PLAVNWTGVY VGGQLGAGFG
PKHWSDSIGS TTSLVNPGSD FPAGTPPGLN VGGFGKSTPM AGGLGGAQLG YNFQTGRTVL
GVEADVAFAD LKGSHTIYSG LGGGQAEAHT TALGSVTGRV GYAVERNLLY VKAGGAWAVT
DHTLDTSSIF IPSQGEGCCH DNVRSTRLGW TVGAGLEYAV DRHWSAKLEY DYMDFGSQSV
SFPVNARLGL PSVDIDQAFH VVKMGVNYKL DWGVVASN
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