Gene RPC_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2780 
Symbol 
ID3970120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3017405 
End bp3018310 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID637925890 
Productpyruvate carboxyltransferase 
Protein accessionYP_532647 
Protein GI90424277 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.262601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.241199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CCGTTCGCAT CGTCGAGGTC GGTCCGCGCG ATGGGCTGCA GAACGAAAAG 
ACGCCGATCG GCGTCGAAGC CCGCATCGGC TTCATCGAGG CGCTGCTGGG CGCCGGGCTC
ACCACCATCG AGGTCGGCGC CTTCGTCTCG CCTAAGGCGA TCCCGCAGAT GCAGGGCTCC
GCCGAAGTGC TGCGCGGCGT GCAGCATCTC GCCGGGGAAT TCCACGTGCT GGTGCCGAAC
GAAAAGGGCT ATGACGCCGC GCGTGCCGCC GGAGCCAAAG TGATCGCGGT GTTCGCCTCG
GCCTCGGAAG GATTCTCTCG CGCCAATATC AATTGCTCGG TGGAAGAGTC GATTGCGCGT
TTCAAGCCGG TGATCGCGCG CGCGACAGCA GACGGCATCA AGGTGCGCGG TTATGTGTCT
TGCGTGCTCG GCTGCCCCTA TGACGGCGCG GTCGATCCGC AAGCCGTGGT CGATGTCGCG
ACCACGCTAT GGGACCTCGG CTGCTATGAG GTCTCGCTCG GCGACACCAT CGGCGTCGGC
ACCCCGAAGA AAGTCCGCGA ATTGCTGCGC GCCTGCGCCG AGGCGGTGCC GATGCGAAGT
CTGGCGATGC ATTTCCACGA CACCTACGGC CAGGCACTGG CGAATCTCTA TGCCGGGCTG
GAGGAGGGCG CGCGGGTGAT CGACGCCGCC GCCGGCGGGC TCGGCGGCTG CCCCTATGCG
CCGGGCGCCA CCGGCAACGT CGCCACCGAG GACGTGGTCT ATCTGCTCGA AGGTTTGGGA
ATCAGAACCG GCGTCGATCT CGACCGGCTG GTGACGGCGA GCAACGCGGT CGGTGCCCTC
ATCGGGCGCG CGCCGCCGAG CCGGGTGGCG GCGGCGATCG GCGCGAAGCA GCGGCGAACA
TCGTAG
 
Protein sequence
MSDSVRIVEV GPRDGLQNEK TPIGVEARIG FIEALLGAGL TTIEVGAFVS PKAIPQMQGS 
AEVLRGVQHL AGEFHVLVPN EKGYDAARAA GAKVIAVFAS ASEGFSRANI NCSVEESIAR
FKPVIARATA DGIKVRGYVS CVLGCPYDGA VDPQAVVDVA TTLWDLGCYE VSLGDTIGVG
TPKKVRELLR ACAEAVPMRS LAMHFHDTYG QALANLYAGL EEGARVIDAA AGGLGGCPYA
PGATGNVATE DVVYLLEGLG IRTGVDLDRL VTASNAVGAL IGRAPPSRVA AAIGAKQRRT
S