| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2775 |
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| Symbol | secF |
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| ID | 3970153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3012485 |
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| End bp | 3013489 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925885 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_532642 |
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| Protein GI | 90424272 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.33037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACACACT GGATCTTGAT TGGGCTTGGC GCCGTGATCG CGGTGCTGAC GGTTGTCAGC
ATCATGGGCT GGCTGCCGTC GCTGCGCATC GTCCCCGACG ACACCCATTT CGACTTCACC
CAGTTTCGCC GGATCAGTTT TCCGATCTCG GCGCTGCTGT CGATCGCCGC GATCACGCTG
TTCTTCACCC ACGGCTTGAA CTTCGGCATC GACTTCAAGG GCGGTACGCT GCTCGAGGTG
CAGGCCAAGA CCGGCGCCGC CGATATCCCG GCGATGCGCG CGACGCTGAG CGCGCTCGGT
CTCGGTGACG TGCAGTTGCA GCAGTTCGGC GGTCCCGCCG ACGTGCTGAT CCGGGTCGCT
GAACAACCCG GCGGCGACGC CGCGCAGCAG GAAGCGGTGC AGAAGGTGCG CGCCGCGCTC
GGCGACAATG TCGAGTACCG CCGCGTCGAA GTGGTCGGGC CGCGGGTGTC CAGCGAACTG
TTGGCCTACG GCATGCTCGG GCTGATGCTG GCGATCTTCT CGATCCTGAT CTACCTCTGG
TTCCGCTTCG AATGGCAGTT CGCGCTCGGC GCGATGATCG CCAACGTCCA CGACATCGTG
CTGACCATCG GCTTCATGTC GATCACCCAG GTCGATTTCG ATCTCACCTC GATCGCGGCG
CTGTTGACGA TTCTCGGCTA CTCGTTGAAC GACACCGTGG TGATCTACGA CCGGATTCGC
GAAATGCTGC GGCGTTACAA GAAAATGCCG ATGCCGCAAC TCCTGAACGA ATCGATCAAT
TCGACGCTGT CGCGCTCGAT CATCACCCAC GTCACGGTGA CGCTGGCGCT GTTGGCGCTG
CTGCTGTTCG GCGGTCACGC CATCCATAGC TTCACCGCGG TGATGATGTT CGGCGTGGTG
CTGGTCGGCA CCTACACGTC GATCTTCATC GCGGCTCCGA TCCTGATCTA CCTTGGCGTC
GGCATGAACC GGCACGACGC CAAGGAGCCG GCGTCGAAGC CCTGA
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| Protein sequence | MTHWILIGLG AVIAVLTVVS IMGWLPSLRI VPDDTHFDFT QFRRISFPIS ALLSIAAITL
FFTHGLNFGI DFKGGTLLEV QAKTGAADIP AMRATLSALG LGDVQLQQFG GPADVLIRVA
EQPGGDAAQQ EAVQKVRAAL GDNVEYRRVE VVGPRVSSEL LAYGMLGLML AIFSILIYLW
FRFEWQFALG AMIANVHDIV LTIGFMSITQ VDFDLTSIAA LLTILGYSLN DTVVIYDRIR
EMLRRYKKMP MPQLLNESIN STLSRSIITH VTVTLALLAL LLFGGHAIHS FTAVMMFGVV
LVGTYTSIFI AAPILIYLGV GMNRHDAKEP ASKP
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