Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2709 |
Symbol | |
ID | 3970301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2937857 |
End bp | 2939506 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925820 |
Product | acyl-CoA synthetase |
Protein accession | YP_532577 |
Protein GI | 90424207 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG CGACTAATCA GTACCGCATC GGATTGGATC AGACCCCGGC GAATTACGTG CCGCTGTCGC CGCTGAGCTT CCTCGAACGC AGCGCCACGG TCTATCCGGA ACTCACCAGC ACGGTCTATG AGGGGCGGCA TTTCACCTGG AGCCAGACCC GCGCGCGCTG CCACCGCTTC GCCTGCTATC TCGCCAGCCG CGGCGTCGCA CGCGGCGACA CCGTGGCGGC AATGCTGCCG AACGTTCCAG CGATGAACGA GGTGCATTTC GCGGTGCCGA TGCTGGGCGC GGTGCTGAAC GCGCTCAACA TCCGGCTGGA GCCCTCGTCG ATCGCGTTCC AACTCGACCA TGGCGGCGCC AAGGTAATCC TGGTCGATCC GGAATTCGCC GCGGTGATTT CCGACGCGCT GGCGCTGATG GCCGGGCCGC GGCCGCTGGT GATCGACGTC GACGATGCGA GCTTTAGCGG CGGACAGCGG ATCGGCGAGA TCGAATACGA GGCCGCCCTC GCCGCCGGCG ATCCGGATTT CGTCGGCGTG CGGCCTGATG ATGAATGGGA CGCCATTTCA CTCGGCTATA CGTCGGGCAC CACCGGCAAT CCGAAGGGCG TGGTGACGCA TCACCGCGGC GCCTATCTCA ATGCGGTGAG CAACATCCTG GCCGCCAATT TCGGCCCTCA CCCGGTGTAT CTGTGGACGC TGCCGATGTT TCACTGCAAC GGCTGGTGCT TCCCCTGGAC CATCGCGGCC GCCGCCGGCG TCAACGTCTG CCTGCGCAAG GTCGACCCCG CCAAGATCTT CGAACTGATC GAACAGCACG GCGTCACCCA CATGTCCGGC GCGCCGATCG TCTACAACAC GCTGATCAAC GCCCCCAGCG CGCCGAAGAC GCCGCGCAAC AAGCCGGTGG TCGGGCTGAT CGCCGGCGCC GCACCGCCGG TCGCGGTGCT GGCCGGCGCC GAAACCATCG GCATCAAGCT GACGCATGTC TACGGCCTGA CCGAAGTCTA CGGCCCCGCC TCGGTCTGCG CCGAGCAACC CGGCTGGGAC GATCTGCCGG TCGCCGAGCG CGCCCAGCTG AAGCGCCGGC AGGGCGTCCC CTACCCGCTG CAGGAAGCCG TCACGGTGCG CGATCCCGAC ACCATGGAAG AAGTGCCGCG CGACGGCGAG ACCATCGGCG AGGTGATGTT CCGCGGCAAT ATCGTGATGA AGGGTTACCT CAAGAACGAG AAGGCCACCC AGGAAGCCTT CGCCGGCGGC TGGTTTCACA CCGGCGATCT CGGCGTGCTC GACGAATTCG GCTACGTCAT CATCAAGGAC CGCTCCAAGG ACATCATCAT CTCCGGCGGC GAGAACGTCT CCTCCGTCGA AGTCGAAGAC ATTCTCTACA AACACCCGGC GATCCTGTTC GCCGCGGTGG TCGCCAAGCC CGATCCGAAA TGGGGCGAAG TGCCCTGCGC CTTCGTCGAA TTGAAAGACG GCGCGCAAGC CACCGAGGCC GAGATCATCG CATTTTGCCG CGAGCACATG CCGGGCTTCA AGACCCCGAA GGTGGTGACG TTTGCGACGA TCCCGAAAAC CTCGACCGGC AAGATCCAGA AGTTCATGCT GCGCGATCAG GTCAAATCGG CGAAGGCGAT ATCGGAGTAG
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Protein sequence | MTSATNQYRI GLDQTPANYV PLSPLSFLER SATVYPELTS TVYEGRHFTW SQTRARCHRF ACYLASRGVA RGDTVAAMLP NVPAMNEVHF AVPMLGAVLN ALNIRLEPSS IAFQLDHGGA KVILVDPEFA AVISDALALM AGPRPLVIDV DDASFSGGQR IGEIEYEAAL AAGDPDFVGV RPDDEWDAIS LGYTSGTTGN PKGVVTHHRG AYLNAVSNIL AANFGPHPVY LWTLPMFHCN GWCFPWTIAA AAGVNVCLRK VDPAKIFELI EQHGVTHMSG APIVYNTLIN APSAPKTPRN KPVVGLIAGA APPVAVLAGA ETIGIKLTHV YGLTEVYGPA SVCAEQPGWD DLPVAERAQL KRRQGVPYPL QEAVTVRDPD TMEEVPRDGE TIGEVMFRGN IVMKGYLKNE KATQEAFAGG WFHTGDLGVL DEFGYVIIKD RSKDIIISGG ENVSSVEVED ILYKHPAILF AAVVAKPDPK WGEVPCAFVE LKDGAQATEA EIIAFCREHM PGFKTPKVVT FATIPKTSTG KIQKFMLRDQ VKSAKAISE
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