Gene RPC_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2678 
Symbol 
ID3970480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2907053 
End bp2907811 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID637925788 
ProductMerR family transcriptional regulator 
Protein accessionYP_532546 
Protein GI90424176 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00961924 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTGG ACAAAGCGCC CGATGCATTC CGAACCATCA GCGAGGTCGC CGACGACCTC 
GACATCCCGC AGCACGTGCT GCGTTTCTGG GAAACCCGAT TCGCCCAGAT CAAGCCGATG
AAGCGCAGCG GCGGCCGCCG CTATTATCGC CCCGACGACG TCGACCTGCT GCGCGGCATT
CGCCGGCTGT TGTACGGCGA GGGCTACACC ATCCGCGGCG TGCAGCGCAT CCTGAAAGAG
CAGGGCATCA AATCGGTGCA AGGCCTCGCC AACGGCCTGG CCCGGCCGGC GGCGCCGGAT
CCGCGTGATG TCGAATCGCC GTCCGGCGGG TTCGACGAGG CCAACCTGCC GTCGCCGGAG
CTTGACGCGG ACACCGACGA CGAGGCCGAG GATCACCGCA CGGCGCCGGT CGTGGTGCGG
CGTGAACCGG CGCTGGGTGC GCTGGGCGCG GCGCGGCGCG AACCTACGCT TCGATCTGCA
GTTGGATCTA CCCTTGGTTC TCCGCTTGGA TCTCCGCTCG GCGCTTCCTT GGGGCCGGCA
CGGCGCGAGC CGGATCTTGG GCCGGATCTT GGGCCGCCGC ATGGGCCGGC GATGCTGCGG
CACGCCGAGG ACGGTCGCCC CTCCGCCCAT TCGGTCTCGG CTGCGAATCG GCGGGAACTC
GATCTCGAGC GGTTGGAAAC CGCGTTGCAG GATCTGGTCG CCTGCAAGCA GATGCTGGAC
AGCGCCTTCG AGGACGGCTC GCCGTCGGCC GCGCTGTGA
 
Protein sequence
MHLDKAPDAF RTISEVADDL DIPQHVLRFW ETRFAQIKPM KRSGGRRYYR PDDVDLLRGI 
RRLLYGEGYT IRGVQRILKE QGIKSVQGLA NGLARPAAPD PRDVESPSGG FDEANLPSPE
LDADTDDEAE DHRTAPVVVR REPALGALGA ARREPTLRSA VGSTLGSPLG SPLGASLGPA
RREPDLGPDL GPPHGPAMLR HAEDGRPSAH SVSAANRREL DLERLETALQ DLVACKQMLD
SAFEDGSPSA AL