Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2659 |
Symbol | glyA |
ID | 3970519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2888201 |
End bp | 2889523 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637925770 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_532528 |
Protein GI | 90424158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.719136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.877467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAT CCGCCAAGCC CGCCGCTAAG TCCGCCGCCA CCGCCTCCGC CCCCGACTCG TTCTTTTCCG CCACGATTGC CGATGCCGAT CCGGAGATCG CCGCGGCGAT TGCGGGCGAA CTCGGCCGGC AGCGCCACGA GATCGAACTG ATCGCCTCGG AGAACATCGT CAGCCGCGCG GTGATGGAAG CCCAGGGCTC GGTGATGACC AATAAATACG CCGAGGGCTA TCCCGGCCAC CGCTATTACG GCGGCTGCGA ATTCGTCGAC GTCGCCGAGA ATCTGGCGAT CGAGCGCGCC AAAAAGCTGT TCGGCGCCGG TTTTGCCAAT GTGCAGCCGA ATTCCGGCAG CCAGATGAAC CAGGCGGTAT TCCTGGCCCT GCTGCAGCCA GGCGACACCT TCATGGGGCT TGATCTCGCC GCCGGCGGCC ATCTCACCCA TGGCTCTTCG GTCAACATGT CCGGCAAATG GTTCAAGCCG GTGCATTACG GCGTGCGCCG CGAAGACGGC ATCATCGACA TGGACGAGGT CGCCAAGATC GCCGAGGCCA ACAAGCCGAA GCTGATCATC GCTGGTGGGT CGGCCTATTC GCGGGCCTGG GACTTCAAGC GGTTCCGCGA GATTGCCGAC AGTGTCGGGG CCTATTTCAT GGTCGATATG GCGCATTTCG CTGGCCTCGT CGCCGGCGGC GTCCATGCCA ACCCGGTGCC GCACGCCCAT GTCGTCACCA CCACCACGCA CAAATCGCTG CGCGGCCCGC GCGGCGGGTT GATCCTCACC AATGACGAGG CGCTGGCCAA GAAGTTCAAT TCGGCGATCT TCCCCGGGCT GCAGGGCGGC CCGCTGATGC ATGTCATCGC CGCGAAGGCC GTGGCGTTCA AGGAAGCGCT GCAGCCGGAC TTCAAGGTCT ACGCGAAGAA CGTCGTCGAA AATGCCAAGG CGCTTGCGGA AACCCTGCGC GGCCACGGCT TCGATATCGT CTCCGGCGGC ACCGACAACC ATCTGATGCT GGTCGATCTG CGGCCGAAGA GCCTGAAGGG CAATGTGTCC GAGAAGGCGC TGGTCCGCGC CGGCATCACC TGCAACAAGA ACGGCATTCC CTACGATCCG GAAAAGCCGT TCGTCACCTC GGGCATTCGC TTGGGAACTC CGGCGGCCAC CACCCGCGGC TTCGGCGTCG CCGAATTCCA GCAGGTCGGC GGCATGATCG CCGAGGTGCT GAACGCCATC GCGCAGTCCG AAGACGGCAC CGCGCCGTTG GTCGAAGCCG CGGTCAAGGC ACGGGTCAAG GAGCTCACCG ATCGCTTCCC GATCTATCAG TAA
|
Protein sequence | MSASAKPAAK SAATASAPDS FFSATIADAD PEIAAAIAGE LGRQRHEIEL IASENIVSRA VMEAQGSVMT NKYAEGYPGH RYYGGCEFVD VAENLAIERA KKLFGAGFAN VQPNSGSQMN QAVFLALLQP GDTFMGLDLA AGGHLTHGSS VNMSGKWFKP VHYGVRREDG IIDMDEVAKI AEANKPKLII AGGSAYSRAW DFKRFREIAD SVGAYFMVDM AHFAGLVAGG VHANPVPHAH VVTTTTHKSL RGPRGGLILT NDEALAKKFN SAIFPGLQGG PLMHVIAAKA VAFKEALQPD FKVYAKNVVE NAKALAETLR GHGFDIVSGG TDNHLMLVDL RPKSLKGNVS EKALVRAGIT CNKNGIPYDP EKPFVTSGIR LGTPAATTRG FGVAEFQQVG GMIAEVLNAI AQSEDGTAPL VEAAVKARVK ELTDRFPIYQ
|
| |