Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2646 |
Symbol | |
ID | 3970506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2876862 |
End bp | 2877731 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637925757 |
Product | LysR family transcriptional regulator |
Protein accession | YP_532515 |
Protein GI | 90424145 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.774595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTCG CAGCGCTGGC GGTGTTTCGT ACTGTGGCAA CCGAGCAGAG CGTGACCCGG GCGGCCGAGT TGCTGGGGCG GGTGCCCTCC AACGTCACCA CGCGGATCCA GCAGCTGGAA GCCGAAATCG GGGTGGCGTT GTTCCAAAGG GACCGCAGGG GCATGGCGCT CACGGCGGAG GGGAAAATCT ATCTCGACTA CGCGGACCGC ATCCTCAACC TGGCTGATGA GGCGCAGCAG GTTGTGCACC CCACCGCGCC GCGCGGCGTT TTGCGGATCG GTTCGATGGA ATCCACCGCC GCTGCGCGCT TGATGCAGCC TTTGGCAAAA TTCAATGCGA CCTGGCCCGA CGTCACCATC GACCTGTCGA CAGGCCCGAC CCGGCCACTG GTCGAGGCCT TGTTGGCGCG GCGGATCGAC TGCGCCCTCG TCGCGATTCC CGACGACATC GGCTGGCTCG GGGAGGGTGA ACTTGAGACC GTCAGCGTGT ATCAGGAACA ACTGATCCTG CTATTGCCGC CCGGACATCC CGAAGTCGAG CAGATCGACG ATATCAAGCC GCGTTCGCTG GCTGCCTTCG CGCCCGGTTG CACCTACCGG ATGCTTGCTG AGCAGTGGCT GACCGGTCTC GGCACCAGGC CGGCACAGAT CCACTTTCAA GAGGTGAAGT CGTATCACGC CATGGTGGCG TGCACCGCGG CCGGCTCCTG CTTTGCGATC CTGCCCCGAA GTGTCCTCGA TCTCATTCCT GATGCCGGGC GCTTTACCAT CAAGCCGCTG ATGACGGTTG ACACCGTCCT CGCCAGCCGG CCTGGATTCA AGACGCCGGC CTTTGTTGAA TTCCGTAACA TGCTTGCCGC GTTCTCGTAG
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Protein sequence | MDLAALAVFR TVATEQSVTR AAELLGRVPS NVTTRIQQLE AEIGVALFQR DRRGMALTAE GKIYLDYADR ILNLADEAQQ VVHPTAPRGV LRIGSMESTA AARLMQPLAK FNATWPDVTI DLSTGPTRPL VEALLARRID CALVAIPDDI GWLGEGELET VSVYQEQLIL LLPPGHPEVE QIDDIKPRSL AAFAPGCTYR MLAEQWLTGL GTRPAQIHFQ EVKSYHAMVA CTAAGSCFAI LPRSVLDLIP DAGRFTIKPL MTVDTVLASR PGFKTPAFVE FRNMLAAFS
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