Gene RPC_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2646 
Symbol 
ID3970506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2876862 
End bp2877731 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content63% 
IMG OID637925757 
ProductLysR family transcriptional regulator 
Protein accessionYP_532515 
Protein GI90424145 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.774595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTCG CAGCGCTGGC GGTGTTTCGT ACTGTGGCAA CCGAGCAGAG CGTGACCCGG 
GCGGCCGAGT TGCTGGGGCG GGTGCCCTCC AACGTCACCA CGCGGATCCA GCAGCTGGAA
GCCGAAATCG GGGTGGCGTT GTTCCAAAGG GACCGCAGGG GCATGGCGCT CACGGCGGAG
GGGAAAATCT ATCTCGACTA CGCGGACCGC ATCCTCAACC TGGCTGATGA GGCGCAGCAG
GTTGTGCACC CCACCGCGCC GCGCGGCGTT TTGCGGATCG GTTCGATGGA ATCCACCGCC
GCTGCGCGCT TGATGCAGCC TTTGGCAAAA TTCAATGCGA CCTGGCCCGA CGTCACCATC
GACCTGTCGA CAGGCCCGAC CCGGCCACTG GTCGAGGCCT TGTTGGCGCG GCGGATCGAC
TGCGCCCTCG TCGCGATTCC CGACGACATC GGCTGGCTCG GGGAGGGTGA ACTTGAGACC
GTCAGCGTGT ATCAGGAACA ACTGATCCTG CTATTGCCGC CCGGACATCC CGAAGTCGAG
CAGATCGACG ATATCAAGCC GCGTTCGCTG GCTGCCTTCG CGCCCGGTTG CACCTACCGG
ATGCTTGCTG AGCAGTGGCT GACCGGTCTC GGCACCAGGC CGGCACAGAT CCACTTTCAA
GAGGTGAAGT CGTATCACGC CATGGTGGCG TGCACCGCGG CCGGCTCCTG CTTTGCGATC
CTGCCCCGAA GTGTCCTCGA TCTCATTCCT GATGCCGGGC GCTTTACCAT CAAGCCGCTG
ATGACGGTTG ACACCGTCCT CGCCAGCCGG CCTGGATTCA AGACGCCGGC CTTTGTTGAA
TTCCGTAACA TGCTTGCCGC GTTCTCGTAG
 
Protein sequence
MDLAALAVFR TVATEQSVTR AAELLGRVPS NVTTRIQQLE AEIGVALFQR DRRGMALTAE 
GKIYLDYADR ILNLADEAQQ VVHPTAPRGV LRIGSMESTA AARLMQPLAK FNATWPDVTI
DLSTGPTRPL VEALLARRID CALVAIPDDI GWLGEGELET VSVYQEQLIL LLPPGHPEVE
QIDDIKPRSL AAFAPGCTYR MLAEQWLTGL GTRPAQIHFQ EVKSYHAMVA CTAAGSCFAI
LPRSVLDLIP DAGRFTIKPL MTVDTVLASR PGFKTPAFVE FRNMLAAFS