| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2635 |
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| Symbol | |
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| ID | 3973044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2866009 |
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| End bp | 2868294 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925746 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_532504 |
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| Protein GI | 90424134 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.57974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATT GGAGCCGTAA TTCACGGCAG ATGGAGGCTG CGGGCGGGAC CGTCGCGGTG
TTGAAGCCGG CTGCGGTGAA GCCGGCGCGG CCGCGCTCGC GCATGATGCG GCAATACGAC
CTGGTCGAGC GGGTCCGATC CTACAATCCG GATACCGACG AGGACCTGCT GAACCGCGCC
TATGTGTACG CCATGATGGC GCATGGCGAG CAGACCAGGG CGTCGGGCGA CCCGTATTTT
TCGCATCCGC TCGAAGTCGC GGCGATTCTC ACCCACCTCA AGCTCGACGA TGCTACCATC
GTCGCGGCGC TGCTTCATGA TACGATTGAG GATACCGAGG CAACCCGCAC CGAGATCGAC
AATATCTTCG GTCACGAAAT CGGAGCGCTG GTCGAGGGGC TGACCAAGCT GAAGCGCCTG
GAGCTGGTTT CGCGGGAGGC CAAGCAGGCG GAAAACCTGC GCAAGCTGTT GCTGGCGGTG
TCCAACGACG TCCGGGTGCT GCTGATCAAG CTGGCCGACC GGCTGCACAA TATGCGCACG
CTCGAATTCG TGCCGCCGGC GTCGCGGCAG CGCATCGCCG AGGAGACGCT GGACATCTAT
GCGCCGCTGG CCGGCCGCAT GGGCATGCAG GAGATGCGCG AAGAGCTGGA AGACCTCTCG
TTCCAGAGCC TCGATCCCGA TGCCTTCGCG GTGGTGATGC AGCGGCTGGA TTCGCTGGCC
GAGCGTAACC GAAATTTGAT CGGCGAGATC GAGACCCAGC TGTCCGCCAA CCTCGCCAAG
AACGGGCTCT CCGCCGAGGT GACCGGCCGG CGCAAGCGGC CGTTTTCGAT CTGGACCAAG
ATGGAGCGCA AATCGGTCGG CTTCGAGCAA TTGTCCGACA TCTACGGCTT CCGCGTGGTG
CTGAAGGATG TCGAGGCCTG CTACCGCGCG CTCGGCGTGG TCCATACCAC CTGGCCGGTG
GTGCCGGGCC GCTTCAAGGA CTACATCTCG ACCCCGAAGC AGAACGACTA CAAGTCGATC
CACACCACGG TGATCGGCCC CGGCCAGCAG CGCGTCGAGC TGCAGATCCG CACCGAAGAG
ATGGACCAGA TCGCCGAGAT CGGCATCGCC GCGCACTCCT TCTACAAGGA CGGCGTCGGC
TCGCCGACCG AAATGTTGAA GCGCGAGAGC AACGCCTTCG CCTGGCTGCG CCACACTATC
GAAGTGCTTT CGGAAAGCGC CAATCCTGAA GAGTTTTTGG AGCACACCAA GCTCGAACTG
TTCCACGACC AGGTGTTCTG CTTCACCCCC AAGGGCAAGC TGATCGCGCT GCCGCGCGCC
GCCAATGTGA TCGATTTCGC CTATGCGGTG CACACCGATG TCGGCAATTC CGCGGTGGGC
TGCAAGATCA ACGGCAAGTT CGCGCCGTTG TCCTCGGAAT TGCAGAACGG CGACGAGGTC
GAGGTGCTGA CCTCGGCGGC CCAAGAGGCG CCGCCGTCGG CCTGGGAATC GCTGGCGGTC
ACCGGCAAGG CCCGCGCCGC GATCCGCCGC GCCACCCGCA CCGCGGTGCG CGATCAATAT
GCCGGGCTCG GCCGCCGCAT CGTCGAGCGG TTGTTCGTCC GCGCCAAGAT CGACTACGCC
GACGACAAGC TGAAGGGGGC GCTGCCGCGG CTGGCGCGGC CGTCGATCGA CGAGGTGATG
GCCTCGGTCG GGCGCGGCGA ACTGCGCGCC TCCGACGTCG CCCGCGCGAT GTATCCGGAC
TACAAGGAGG AGCGGCTCGG CCGCTTCGCC GGCAAGCGCG ATCCGGCCGA CGTCACCAAG
CTGAAAGCGC CGGGCTCCGC GGCGCGCGTC ACCTCGGTGA TTCCGATCCG CGGCCTCAAT
TCCGACCTGC CGGTGAAGTT CGCGCCGAAC GGCGGCGCGG TGCCGGGCGA TCGCATCGTC
GGCATCGTTT CGCCGGGCGA GGGCATCACC ATCTATCCGA TCCAGTCGCC GGCCTTGAAG
GATTTCGAGG AAGAGCCGGA GCGCTGGCTG GACGTCAAAT GGGACGTCGA CGAAACCACG
CCGCAGCGCT TTCCGGCGCG GCTGTTCGTG CAGAACGTCA ACGAGCCCGG CAGTCTGGCG
CAAATCGCCA CCGTGATCGC CGAGCACGAC GGCAACATCG ACAATATCAA CATGAGCCGG
CGTTCGCCGG ACTTCACCGA ACTCACCATC GATCTCGAGG TCTATGACCT CAAGCATCTC
AGCGCCATCA TCGCGCAGTT GCGCGCCAAG GCGGTGGTCG CCAAGGTCGA GCGGGTGAAT
GGCTGA
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| Protein sequence | MAHWSRNSRQ MEAAGGTVAV LKPAAVKPAR PRSRMMRQYD LVERVRSYNP DTDEDLLNRA
YVYAMMAHGE QTRASGDPYF SHPLEVAAIL THLKLDDATI VAALLHDTIE DTEATRTEID
NIFGHEIGAL VEGLTKLKRL ELVSREAKQA ENLRKLLLAV SNDVRVLLIK LADRLHNMRT
LEFVPPASRQ RIAEETLDIY APLAGRMGMQ EMREELEDLS FQSLDPDAFA VVMQRLDSLA
ERNRNLIGEI ETQLSANLAK NGLSAEVTGR RKRPFSIWTK MERKSVGFEQ LSDIYGFRVV
LKDVEACYRA LGVVHTTWPV VPGRFKDYIS TPKQNDYKSI HTTVIGPGQQ RVELQIRTEE
MDQIAEIGIA AHSFYKDGVG SPTEMLKRES NAFAWLRHTI EVLSESANPE EFLEHTKLEL
FHDQVFCFTP KGKLIALPRA ANVIDFAYAV HTDVGNSAVG CKINGKFAPL SSELQNGDEV
EVLTSAAQEA PPSAWESLAV TGKARAAIRR ATRTAVRDQY AGLGRRIVER LFVRAKIDYA
DDKLKGALPR LARPSIDEVM ASVGRGELRA SDVARAMYPD YKEERLGRFA GKRDPADVTK
LKAPGSAARV TSVIPIRGLN SDLPVKFAPN GGAVPGDRIV GIVSPGEGIT IYPIQSPALK
DFEEEPERWL DVKWDVDETT PQRFPARLFV QNVNEPGSLA QIATVIAEHD GNIDNINMSR
RSPDFTELTI DLEVYDLKHL SAIIAQLRAK AVVAKVERVN G
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