| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2629 |
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| Symbol | |
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| ID | 3973038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2861547 |
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| End bp | 2862506 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925740 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_532498 |
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| Protein GI | 90424128 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.121971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTGCT TTGAAAATAG TCAGGCGCGG CGTGTTCTTT CGAGGCCGCG CCGAGTCAGG
AGAACAGCTT TGGCCACCAC CACCGCATTT CGGGGCTCTT TCACCGCCCT GGTCACGCCT
TTCAAGAATG GTTCGCTCGA CGAAGAGGCG TTTCGCAAGC TGGTGGACTG GCAGATTTCC
GAAGGAACCG CCGGCCTGGT GCCGGTCGGC ACCACCGGCG AAAGCCCGAC GCTCAGCCAT
GCCGAGCACC ACAAGGTGGT GGAATGGTGC GTCCAGGAGG CCAAGGGCCG GGTCCCGGTG
ATCGCCGGAG CCGGCTCGAA TTCCACCAAG GAAGCCGTCG AACTGGCCCA GCACGCCGAA
GCCGCGGGCG CCGACGCGGT GCTGGTGGTG ACGCCGTATT ACAACAAGCC GACCCAGGAG
GGCATGTATC TGCACTTCAA GGCGGTGAAC GATGCGATCG GCATTCCGAT CATCATCTAC
AACATCCCGC CGCGCTCGGT GGTCGACATG TCGGTCGACA CCATGACCAG GCTTTACGAA
TTGAAGAACA TCGCCGGCGT CAAGGACGCC ACCGCCAATC TTAGCCGGGT GTCGCAGCAG
CGCCACGCCA TGGGGCCGGA TTTCATCCAG CTTTCCGGCG AGGACATGAC CGCGCTGGCC
TATATGGCGG CGGGCGGCCA TGGCTGCATT TCGGTGGTGT CGAACGTGGC GCCGAAGCCC
TGCTCGGACC TGATGATCGC CGTCGCCAAG GGCGACTATG CCGCCGCGCT GAAGATCCAG
GACCGGCTGG TGCCGCTGCA CGACGCGGTG TTCAAGGAGC CGGGCGTCTC CGGCGCCAAG
CACGGGCTGG CGCTGCTCGG CCGCATCCAG GAAGAGGTGC GGCTGCCGCT GATCCCGGTC
ACCGAGCCGA CCCGTGCGGT GATCCGCAGC GCCATGATCC ACGCCGGGCT GATCAACTAG
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| Protein sequence | MNCFENSQAR RVLSRPRRVR RTALATTTAF RGSFTALVTP FKNGSLDEEA FRKLVDWQIS
EGTAGLVPVG TTGESPTLSH AEHHKVVEWC VQEAKGRVPV IAGAGSNSTK EAVELAQHAE
AAGADAVLVV TPYYNKPTQE GMYLHFKAVN DAIGIPIIIY NIPPRSVVDM SVDTMTRLYE
LKNIAGVKDA TANLSRVSQQ RHAMGPDFIQ LSGEDMTALA YMAAGGHGCI SVVSNVAPKP
CSDLMIAVAK GDYAAALKIQ DRLVPLHDAV FKEPGVSGAK HGLALLGRIQ EEVRLPLIPV
TEPTRAVIRS AMIHAGLIN
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