Gene RPC_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2624 
Symbol 
ID3973303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2857857 
End bp2858606 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID637925735 
Producthypothetical protein 
Protein accessionYP_532493 
Protein GI90424123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.288603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGG AGGCTATGGT CACACCCCTT TCCCCGCCCC GCATCCTGCC GAGTGGCGAC 
GCCGCGATCA CCGTCGAGTT CGGCCGCGAG ATCGATCAGC GTGCCAGTGA ACGCGTGCTT
GAACTCGATC GCGCGTTGGC CAATACGCCA ATCGCCGGTG TCATTGAAAC CGTGCCGACC
TATCGCTCGT TGCTGGTGCA CTACGATCCC GAACAGATCG GATTCGACGC GCTCGGGGGA
CAACTCACCG CGCTGGCGCA AGCGTCCTCG CAACCTTCCC CGGCGACGAT CCGACACTGG
CGGATTCCGG TGTGCTACGG TGGCGACTAC GGCGTCGATC TCGACGACGT GGCCGGCTCG
CTCGGACTTT CGCCGGACGA GGTCGTCAGG CGCCACGTCG CCGGTGATTA CCGGGTGGCG
ATGATCGGCT TTACGCCGGG CTGGTCTTAT CTCAGCGGGC TCGATCCTTC GTTGACCATG
CCGCGGCGGC AAAGCCCGCG GCTGCTGACG CCCGCCGGCA CCATCTCGAT CGGCGGGGTA
CAGGCCGGCG TGCAGTGCCT GCCCGGCCCG AGCGGCTGGC ATCTGCTGGG GCGCACTCCG
GTGCGAACCT ATCAGTTGCA TCGCGAACCG ATCTTTCTCT TGGAGCCAGG AGACATCGTG
AGATTCTTTG CGATCGACGC CAAACAATTC GCCGAGCAGG ACGCCGCCGC CGAACATGGC
GCCATCGTCG CCGAGTTGGT GGCGTCATGA
 
Protein sequence
MSLEAMVTPL SPPRILPSGD AAITVEFGRE IDQRASERVL ELDRALANTP IAGVIETVPT 
YRSLLVHYDP EQIGFDALGG QLTALAQASS QPSPATIRHW RIPVCYGGDY GVDLDDVAGS
LGLSPDEVVR RHVAGDYRVA MIGFTPGWSY LSGLDPSLTM PRRQSPRLLT PAGTISIGGV
QAGVQCLPGP SGWHLLGRTP VRTYQLHREP IFLLEPGDIV RFFAIDAKQF AEQDAAAEHG
AIVAELVAS