Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2624 |
Symbol | |
ID | 3973303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2857857 |
End bp | 2858606 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925735 |
Product | hypothetical protein |
Protein accession | YP_532493 |
Protein GI | 90424123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.288603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTGG AGGCTATGGT CACACCCCTT TCCCCGCCCC GCATCCTGCC GAGTGGCGAC GCCGCGATCA CCGTCGAGTT CGGCCGCGAG ATCGATCAGC GTGCCAGTGA ACGCGTGCTT GAACTCGATC GCGCGTTGGC CAATACGCCA ATCGCCGGTG TCATTGAAAC CGTGCCGACC TATCGCTCGT TGCTGGTGCA CTACGATCCC GAACAGATCG GATTCGACGC GCTCGGGGGA CAACTCACCG CGCTGGCGCA AGCGTCCTCG CAACCTTCCC CGGCGACGAT CCGACACTGG CGGATTCCGG TGTGCTACGG TGGCGACTAC GGCGTCGATC TCGACGACGT GGCCGGCTCG CTCGGACTTT CGCCGGACGA GGTCGTCAGG CGCCACGTCG CCGGTGATTA CCGGGTGGCG ATGATCGGCT TTACGCCGGG CTGGTCTTAT CTCAGCGGGC TCGATCCTTC GTTGACCATG CCGCGGCGGC AAAGCCCGCG GCTGCTGACG CCCGCCGGCA CCATCTCGAT CGGCGGGGTA CAGGCCGGCG TGCAGTGCCT GCCCGGCCCG AGCGGCTGGC ATCTGCTGGG GCGCACTCCG GTGCGAACCT ATCAGTTGCA TCGCGAACCG ATCTTTCTCT TGGAGCCAGG AGACATCGTG AGATTCTTTG CGATCGACGC CAAACAATTC GCCGAGCAGG ACGCCGCCGC CGAACATGGC GCCATCGTCG CCGAGTTGGT GGCGTCATGA
|
Protein sequence | MSLEAMVTPL SPPRILPSGD AAITVEFGRE IDQRASERVL ELDRALANTP IAGVIETVPT YRSLLVHYDP EQIGFDALGG QLTALAQASS QPSPATIRHW RIPVCYGGDY GVDLDDVAGS LGLSPDEVVR RHVAGDYRVA MIGFTPGWSY LSGLDPSLTM PRRQSPRLLT PAGTISIGGV QAGVQCLPGP SGWHLLGRTP VRTYQLHREP IFLLEPGDIV RFFAIDAKQF AEQDAAAEHG AIVAELVAS
|
| |