| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2590 |
|---|
| Symbol | |
|---|
| ID | 3970698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2817181 |
|---|
| End bp | 2817651 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925700 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_532459 |
|---|
| Protein GI | 90424089 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0399282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.262454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTA CCGAAAACAC ATTGATCCTC GACACCACCC AGGGCCCGGT CACCATCGAG
ATGCGCCCGG ATCTGGCGCC GAACCACGTC GCCCGGATCA AGGAATTGGT CCGCGAAGGC
TTCTACGACG GCGTCGTGTT CCACCGCGTC ATCGAAGGCT TCATGGCGCA GACCGGCTGT
CCGCAGGGCA CCGGCACCGG CGGCTCGGGC CAGAAGCTGA AGGCCGAGTT CAACAAGGAG
CCGCACGTCC GCGGCACCAC CTCGATGGCC CGCGCCGCCA GCCCGGACTC CGGCGACAGC
CAGTTCTTCA TCTGCTTCGA CGACGCCTCG TTCCTCAACA ACCAGTACAC GGTGTGGGGC
AAGGTGGTCG ACGGCATGGA GAACGTCGAC AAGATCAAGC GCGGCGAGCC GGTGAAGGAC
CCCGACAAGA TCGTCAAGGC CCGGATGGCC GCCGACGACG CCGCGGCCTG A
|
|---|
| Protein sequence | MAVTENTLIL DTTQGPVTIE MRPDLAPNHV ARIKELVREG FYDGVVFHRV IEGFMAQTGC
PQGTGTGGSG QKLKAEFNKE PHVRGTTSMA RAASPDSGDS QFFICFDDAS FLNNQYTVWG
KVVDGMENVD KIKRGEPVKD PDKIVKARMA ADDAAA
|
|---|
| |