| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2589 |
|---|
| Symbol | |
|---|
| ID | 3970697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2816569 |
|---|
| End bp | 2817132 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925699 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_532458 |
|---|
| Protein GI | 90424088 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.23776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.250925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAA TTCTAGGCCT CATCGCCGCG CTGCTCTGCG CGGCTCCCGC CATCGCCCAA
CCGCTGCCGG CCAATCTCGA CAAGGCCAAT GCGATCGTGA TCGATTCCAC CAAGGGTCGC
ATCGTGATCA AGCTGCGCAC CGATTTGGCG CCGCAGCACG CCGAGCGCAT CAAGCAGCTG
ACCCGCGAAG GCTTCTACAA CAACGTGCCG TTCCACAGGG TGATGGACGG CTTCATGGCG
CAGACCGGCG ACGGCCAGAA CTTCAACGGC ACCGGCGGCT CGAAATATCC CAACCTGAAG
CAGGAATTCT CCCAGGTGCC GTTCAAGCGC GGCATCGTCG GCATGGCGCG GCGCGGCGAC
AGCGTCGACA CCGCCAATGC GCAGTTCTTC ATCATGTTCG CCGACGGCTC CGGGCTCAAC
GGCCAATATA CCGTGATCGG CGAAGTGGTG ACCGGCATGG ACGTCGTCGA CAAGCTGAAG
AAGGCACCTG CCGGCTCCGC CAGCGGCGCG GTCAGCGACC CCGACAAGAT GGTCAAAGTC
CAGGTCGCCT CCGACATCAA GTAA
|
|---|
| Protein sequence | MIRILGLIAA LLCAAPAIAQ PLPANLDKAN AIVIDSTKGR IVIKLRTDLA PQHAERIKQL
TREGFYNNVP FHRVMDGFMA QTGDGQNFNG TGGSKYPNLK QEFSQVPFKR GIVGMARRGD
SVDTANAQFF IMFADGSGLN GQYTVIGEVV TGMDVVDKLK KAPAGSASGA VSDPDKMVKV
QVASDIK
|
|---|
| |