| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2582 |
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| Symbol | hfq |
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| ID | 3970921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2805552 |
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| End bp | 2805800 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637925692 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_532451 |
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| Protein GI | 90424081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.233324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.226636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCCG ACCGCGCACA GAATCTACAG GATACTTTTC TCAACCACGT ACGTAAGACC
AAAACGCCAC TCACGATCTT TCTGGTCAAC GGGGTCAAGC TGCAAGGCAT TGTCACCTGG
TTCGACAATT TCTGCCTGCT GCTGCGGCGC GACGGACATT CGCAGCTGGT CTACAAGCAT
GCGATCTCCA CCATCATGCC GGGTGCTCCG ATCCAGCTGT TCGAAGGTGG CGAGGACGCC
CCAGCTTGA
|
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| Protein sequence | MAADRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH
AISTIMPGAP IQLFEGGEDA PA
|
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| |