Gene RPC_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2555 
Symbol 
ID3970929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2770822 
End bp2771652 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID637925663 
Producthypothetical protein 
Protein accessionYP_532424 
Protein GI90424054 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.08299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.799621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC CTCCGAACGC CGCCGCCGAA CCGCCCGCCG CGCTGTATTT CGGCGAGGTG 
ATGCACGCCC GCATCAAGCC GGTGGCGCAT CGCTTCAACT ACCGGGTGAT GAGCCTGCTG
ATCGATGTTG GCCGGCTCGA TGAGGCCGAT CACCTGTCGG CGCTGTTCGG CGTCAACCGC
CGGGGGCTGT ACAGCTTCCA CGAATCCGAC CACGGCCCGC GCGACGGTTC GTCGCTGCGC
AACTACGCGC AGCGCTGCGC CGACGAGCAC GGCGTCGACC TCGAAGGCGG CCGGGTGCTG
CTGCTGTGCT ATCCGCGGCT GTTCGGCTTC ACCTTCAACC CGCTGTCGGC GTATTTCTGC
TATCGCGCCG ACGGCGAATT GGCGCTGGTG ATCTACGAAG TCCGCAACAC TTTCGGCGAC
ATCCACGCCT ATGTGCTGCC GGTGACGCCG GATCAGGTCA GCGCCGCCGG CATCCGCCAA
CAGCAGGATA AATTGTTCTA CGTCTCGCCG TTCATCGAGA TGGCGATGCG CTACCATTTC
CGCATCGCGC CGCCCGGCCA ACGGGTCAAA TTGCGGATTC TGGAAACCGA CGCCGAAGGC
GCGGTGCTCG CCGCGACCTT CAACGGCCAC CGCGCGCCGC TCAGCAGCCG CCGCTTGCTG
AAAGCCTTCG TCGGCTTGCC GGCGGTGACC TGGAAGATTT TCGGCGCGAT CCACTGGCAG
GCGCTGCTGC TATGGATCAA AGGTGCGCGA TTGGTGCCCC GGCCGGCGTC CGTTGCCGCA
AAACCCGGCT TGGCGGCCAC GCCGGCCGGC GATTATACTC GGCGAAAATA G
 
Protein sequence
MSNPPNAAAE PPAALYFGEV MHARIKPVAH RFNYRVMSLL IDVGRLDEAD HLSALFGVNR 
RGLYSFHESD HGPRDGSSLR NYAQRCADEH GVDLEGGRVL LLCYPRLFGF TFNPLSAYFC
YRADGELALV IYEVRNTFGD IHAYVLPVTP DQVSAAGIRQ QQDKLFYVSP FIEMAMRYHF
RIAPPGQRVK LRILETDAEG AVLAATFNGH RAPLSSRRLL KAFVGLPAVT WKIFGAIHWQ
ALLLWIKGAR LVPRPASVAA KPGLAATPAG DYTRRK