| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2542 |
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| Symbol | |
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| ID | 3970971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2750507 |
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| End bp | 2755720 |
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| Gene Length | 5214 bp |
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| Protein Length | 1737 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925650 |
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| Product | alpha-2-macroglobulin-like |
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| Protein accession | YP_532411 |
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| Protein GI | 90424041 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.380531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.505843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGGTT TGCTTCGCGC CGTCATGCTG TGCGCCACGC TGGCGCTCGG GCTGTTGTCC
GCCGCGGCCG CCGACAAGGC GTTCAAACGC GACGACCTGG CGGATTCCGC GATCAAGCTG
GAGGCCCAGA TCAAGTCGGA AGCCGGCGCG GTCAGTAAGC CGGTGGCGGC GCTGCGGGCC
GACGCCGACG CCGCCGTGAA GCGGGGCGAC AGCCGCGCCG CGCTGCAGAT CATGGGCCAG
ATCGCCACCG TTTCGCCGGA CGACAGCGGC AACTGGCTGC GGCTGGCGCG CGCCGTGTTC
CGGATCTGGA CGCCGACCGG GAGCGACCAG GCCTTGCTGC TGGAGCGCGC CTCGACCGCA
GCCTATATCG CCTATCAGCG CGCCGGCAAT GCCGGCGAGG AGGCCGAGGC GCTGGCCTTG
CTCGGCCGCG CCTTCGCCGA GCGCAAGCTG TGGCGGCCGG CGCTGGACAC GCTGCGGCTG
TCGCTCGATC TGCGCGAGGT CGCCGAGGTG CGCGGCCAAT ACGAGAAGCT GCGCGACGAC
CACGGCTTCC GGCTGTTGGA CTACACCGTG GATTCCGATT CGGCGTCGCC GCGGGCCTGT
TTCCAGTTCT CCGAGGACCT CGCCAAGCGC GTCGATTTCG CGCCGTTCCT GGCGCAGGCC
GGCACCGACA AGCCGGCGCT GACCAGCGAG GACAAGCAGC TCTGCGTCGA GGGCCTCAAG
CACGGCGAGC GCTACACCGT CCATCTGCGC GCCGGGCTGC CGTCGGCGGT GAAGGAGACG
CTGCCGAAAT CCGCCGAGTT CAACATCTAT GTGCGCGACC GCAAGCCGTT GGTGCGCTTC
ACCGGGCGGG CCTATGTGCT GCCGCGCAGC GGCCAGCGCG GCATTCCGCT GGTCAGCGTC
AACACCAAGA CGGTGTCGGT TGAGGTGTTC CGGATCGGCG ACCGCAATTT GATCAACACC
GTGGTCGGCA GCGACTTCCA GCGCGCGCTG AGCGCCTATG AGTTGACCGA GCTCGGCGGC
GAGCGCGGCA TCAAGGTGTG GAGCGGCGAA CTCGACACCG AGAGCACGCT GAACGCCGAC
GTCACCACCG CGTTTCCGGT CGGCGAAGTG CTGGGCGAAT TGCAACCCGG CGTCTATGTG
ATGGCCGCGG CGGCCAAAGG GCCGGCTGCG TCCGGCGACG AGGACGGCGG CTCGCTGGCG
ACGCAATGGT TCATCGTCTC GGATCTCGGG CTGACCGCGT TCTCCGGCAA TGACGGCATC
CACGTCTTCG TCAACTCGCT GGCCTCGACC GAGCCGGTCG GCAAGGCGGA GGTGCGGCTG
CTCGCCCGCA ACAACGAGAT TCTGGCCACC CGCAAGACCG ACGATTCCGG CCACGTGCTG
TTCGAGTCCG GGCTTTCGCG CGGCGAGGGC GGGTCGTCGC CGGCGCTGCT CACGGTGTCG
GGCGCATCCG CCGACTACGC CTTCCTCAGC CTGAAATCCA ACGCCTTCGA CCTCTCCGAC
CGCGGCGTCT CTGGCCGCGC GGTGCCGGCC GGCGCCGACG CCTTCGTCTA TGCCGAGCGC
GGCGTCTATC GCTCCGGCGA GACGGTCTAT CTCACCGCAT TATTGCGCGA CGGCCAGGGC
AATGCGCTCG CAGGCGCGCC GCTGACCCTG GTGGTGGAGC GGCCGGACGG CGTCGAATTC
CGCCGCGCCG TGCTGCCGGA CCAGGGCGCC GGCGGCCGCA GCCTGACGCT GCCGTTGAAT
TCCGCGGTGC CGACCGGTAC CTGGCGGGTT CGCGCCTTCA CCGATCCGAA GGGAGGAAGC
GTCGGCGAAA CCACCTTCAT GGTCGAGGAC TACGTTCCGG ACCGTATCGA ATTCGATATT
TCCAGCAAGG ACAAGCTGAT CAAAGCTGAT GTTCCTGTGG AACTGAAGGT CGATGGCCAT
TTCCTCTATG GCGCGCCGGC CTCGGGCCTG CAGCTGGAGG GCGACCTGTT GGTGGCGCCA
GCGGCTGATC GGCCCGGCTT TGCCGGCTAT CGCTTCGGCA TTGCCGACGA GGAGACCGAA
AGCCACGAGC GCACCCCGCT CGAGAACCTG CCGGAGGCCG ACGCCAACGG CGTGGCGACT
TTCCCGTTGG TGCTGCCCAA GCCGCCGGCG TCGACCCGGC CGCAGGAGGC GCAGATCTTC
ATCCGCATGG CGGAAGCCGG CGGCCGCGCC GTGGAGCGCA AATTGGTGCT GCCGGTGGTG
CCGGCCGCGG CGGCGATCGG CGTCAAGCCG TTGTTTGCGG ACAAGACCGT CACCGAGGGC
GACAACGCCA ATTTCGACGT GGTGCTGGTG TCGCCGGAGG GCAAGCCGCT GGCCCGCGGC
GGGTTGCGCT ATGAATTGCT CAAGATCGAG ACCCGCTATC AATGGTACCG GCAGAATTCC
TCCTGGGATT ACGAGCCGGT GAAATCGACC AGGCGGGTCG CCGACGGCGA TCTCAGCCTT
GCGGCCGACA AGCCGGCGCG GCTGACGTTC CAGCCGCAGC CCGGCCGCTA CCGGCTCGAC
GTCAAATCCG CCGACGCCGA CGGCCCGCTG ACGCAAGTGC AGTTCGACGT CGGCTGGTAT
TCCGACGGCT CCGCCGACAC GCCCGACCTT CTGGAAACTT CGATCGACAA GCCCGACTAC
GCCGCCGGCG ACACGCTGGT GGTCACGGTC AATGCCCGCA GCGCCGGCAA GCTCACCGTC
AACGTGCTCG GCGACCGGCT GCTGACCACG CAGAGCGTCG ACGTCCAGCA AGGCCAGTCC
CAGGTTAGGC TCGCGGTCGG CAAGGATTGG GGCACCGGCG CCTATGTGGT GACCACGCTG
CGCCGGCCGC TCGACGCCGC AGCGCAGCGG ATGCCCGGCC GCGCCATCGG CCTCAAATGG
TTCGGCATCG ACAAGACCGC GCGGACGCTC TCGGTCGCGC TGTCGCCGCC GGCGCTGATC
CGGCCGTCCA CCACCTTGAC GCTGCCGGTG AAAATCGGCG GGCTCACCCC CGGCGAGGAC
GCCAAGATCG TGGTCGCCGC GGTCGACGTC GGCATTCTCA ACCTCACCAA TTACAAGCCG
CCGGCGCCGG ACGATTACTA TCTCGGCCAG CGCCGCCTGA GCGCGGAAAT CCGCGACCTC
TATGGGCAAT TGATCGACGG CATGCAGGGT TCGCGTGGCC AAATCAGAAG CGGCGGCGAT
TCGGCCGGCG CCGAGCTGCA GGGCAGCCCG CCGACGCAGA AGCCGCTGGC GCTGTATTCC
GGCATCGTCA CCGTGGCGGC CGACGGCACC GCCAGGATCG ATTTCGAGAT CCCGGAATTC
GCCGGCACCG CACGGCTGAT GGCGGTGGCC TGGACCGCCA CCAAGGTCGG CCGCGCTACG
ATCGACGTCA CCGTGCGCGA TCCCGTGGTG CTGACCGCGA CGCTGCCGCG CTTTCTGCTG
GGCGGCGACC GCGGCACGCT GAGCTTCGAT CTCGACAATG TCGAAGGCGC TCCCGGCGAC
TACGCCATCA GCGTCGCCGC CTCGGGGCCG GTGAAACTCG CCGGCAACCC GACCACCACG
CTGAAGCTCG CCGCCAAGCA GCGGAGCACG ATGGCGCTGG CGCTGGAGGC CGGCGGCGCC
GGCACCGCGG CGTTCGACGT CTCGATCAAA GGGCCGAACG GGCTGACCTT GGCGCGGCAC
TACGCGATCG AGGTGAAGCC CGCGACGCAG ATTTTGGCGC GACGTTCGAT CAGGACGCTG
GCGAAGGGCG AGAGCCTGAC GTTGACCTCG GACATGTTCG CCGATCTCGT CCCCGGCACC
GGCGGCGTGT CGCTGTCGGT GGGGCTGTCC ACCGCGCTCG ACGCCGCCAC CATCCTGAAG
GCGCTGGATC GCTATCCGTT CGGCTGCACC GAACAGATCG CCAGCCGGGC GCTGCCGCTG
CTCTATGTCA ACGAGCTCGC GGCCGGCGCG TATCTGGCGA TGGACGGAAC GGTGGACCAG
CGCATCAAGG ACGCGATCGA TCGGCTCTCG GCCCGGCAGG GCTCCAACGG CTCGTTCGGG
CTGTGGTCGG CCGGCGGCGA CGATGCCTGG CTCGACGCTT ACGTCACCGA CTTCCTAACC
CGCGCCCGCG AGAAGGGATT CGTGGTGCCG GACGTGGTGT TCAAGTCGGC GCTCGACCGG
GTCCGCAATG CGGTGGTCAA CGCCGCCGAG CCGGAGAAGG ACGGCGGCCG CGATCTCGCT
TACGGGCTTT ACGTGCTGGC GCGCAACGGC GCGGCACCAA TCGGCGATCT GCGCTATCTC
GCCGATACCA AGCTCGACAA TCTGGCCACC CCGATCGCCA AGGCGCAGCT CGCCGCGGCG
CTGGCGTTGG TCGGCGATCG CGGACGCGCC GAGCGGGTCT ATGCCGACGC GCTGCAGAGT
CTCACGCCGA AGCCCGTGAT CGCGTTCGGC CGGGTCGACT ACGGCTCGGC GCTGCGCGAC
GCCGCGGCTC TGGTGTCGCT CGCCAGCGAG GGCAACGCGC CGCGCGCCAC GCTGACCCAG
GCGGTGCAGC GGGTCGAGGC GGCGAGGGGG CTGACGCCTT ATACGTCGAC GCAGGAGAAC
GCCTGGCTGG TGCTGGCGGC GCGTGCGCTC GCCAAGGAAA CGCTGGCGCT CGAGGTCGAC
GGCAGTCCGG TGAAGACCGC GCTGTATCGC AGCTATAAGG CCAGCGAGAT GGCGGGCCGG
CCGATCAAGA TCGTCAACAC CGGCGACGCC CCGGCGCAGG CGGTGGTGTC GGTCAGCGGC
GCGCCAATGA CGCCGGAGCC GGCCGCATCG AACGGCTTCA AGATCGAGCG CAACTACTTC
GCGCTCGACG GCACCCCGGC GCATATTCTT AAGGCCAAGC AGAACGACCG CTTCGCGGTG
GTGCTGAAGA TCACCGAGGC CAAGCCGGAA TACGGTCACA TCATGGTGGC GGACTATTTG
CCGGCCGGCT TCGAGATCGA CAACCCGCAT CTGGTGTCGT CGGGCGACAG CGGCACGCTG
GGCTGGATCG AGGACGGCGT CGAGCCGGTC CACAGCGAAT TCCGCGACGA CCGCTTCAGC
GCCGCGATCG ACCGCAAGAG CGACGACAAG GCGGTGTTCA CGGTGGCCTA TGTGGTGCGC
GCGGTGTCGC CGGGCAAATA CGTGCTGCCG CAGGCTTACG TCGAGGACAT GTACAATCCC
TCGCGCTATG GCCGCAGCTC CACCGGCAGC GTCGAGGTGC GGCCGGCGAA ATGA
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| Protein sequence | MRGLLRAVML CATLALGLLS AAAADKAFKR DDLADSAIKL EAQIKSEAGA VSKPVAALRA
DADAAVKRGD SRAALQIMGQ IATVSPDDSG NWLRLARAVF RIWTPTGSDQ ALLLERASTA
AYIAYQRAGN AGEEAEALAL LGRAFAERKL WRPALDTLRL SLDLREVAEV RGQYEKLRDD
HGFRLLDYTV DSDSASPRAC FQFSEDLAKR VDFAPFLAQA GTDKPALTSE DKQLCVEGLK
HGERYTVHLR AGLPSAVKET LPKSAEFNIY VRDRKPLVRF TGRAYVLPRS GQRGIPLVSV
NTKTVSVEVF RIGDRNLINT VVGSDFQRAL SAYELTELGG ERGIKVWSGE LDTESTLNAD
VTTAFPVGEV LGELQPGVYV MAAAAKGPAA SGDEDGGSLA TQWFIVSDLG LTAFSGNDGI
HVFVNSLAST EPVGKAEVRL LARNNEILAT RKTDDSGHVL FESGLSRGEG GSSPALLTVS
GASADYAFLS LKSNAFDLSD RGVSGRAVPA GADAFVYAER GVYRSGETVY LTALLRDGQG
NALAGAPLTL VVERPDGVEF RRAVLPDQGA GGRSLTLPLN SAVPTGTWRV RAFTDPKGGS
VGETTFMVED YVPDRIEFDI SSKDKLIKAD VPVELKVDGH FLYGAPASGL QLEGDLLVAP
AADRPGFAGY RFGIADEETE SHERTPLENL PEADANGVAT FPLVLPKPPA STRPQEAQIF
IRMAEAGGRA VERKLVLPVV PAAAAIGVKP LFADKTVTEG DNANFDVVLV SPEGKPLARG
GLRYELLKIE TRYQWYRQNS SWDYEPVKST RRVADGDLSL AADKPARLTF QPQPGRYRLD
VKSADADGPL TQVQFDVGWY SDGSADTPDL LETSIDKPDY AAGDTLVVTV NARSAGKLTV
NVLGDRLLTT QSVDVQQGQS QVRLAVGKDW GTGAYVVTTL RRPLDAAAQR MPGRAIGLKW
FGIDKTARTL SVALSPPALI RPSTTLTLPV KIGGLTPGED AKIVVAAVDV GILNLTNYKP
PAPDDYYLGQ RRLSAEIRDL YGQLIDGMQG SRGQIRSGGD SAGAELQGSP PTQKPLALYS
GIVTVAADGT ARIDFEIPEF AGTARLMAVA WTATKVGRAT IDVTVRDPVV LTATLPRFLL
GGDRGTLSFD LDNVEGAPGD YAISVAASGP VKLAGNPTTT LKLAAKQRST MALALEAGGA
GTAAFDVSIK GPNGLTLARH YAIEVKPATQ ILARRSIRTL AKGESLTLTS DMFADLVPGT
GGVSLSVGLS TALDAATILK ALDRYPFGCT EQIASRALPL LYVNELAAGA YLAMDGTVDQ
RIKDAIDRLS ARQGSNGSFG LWSAGGDDAW LDAYVTDFLT RAREKGFVVP DVVFKSALDR
VRNAVVNAAE PEKDGGRDLA YGLYVLARNG AAPIGDLRYL ADTKLDNLAT PIAKAQLAAA
LALVGDRGRA ERVYADALQS LTPKPVIAFG RVDYGSALRD AAALVSLASE GNAPRATLTQ
AVQRVEAARG LTPYTSTQEN AWLVLAARAL AKETLALEVD GSPVKTALYR SYKASEMAGR
PIKIVNTGDA PAQAVVSVSG APMTPEPAAS NGFKIERNYF ALDGTPAHIL KAKQNDRFAV
VLKITEAKPE YGHIMVADYL PAGFEIDNPH LVSSGDSGTL GWIEDGVEPV HSEFRDDRFS
AAIDRKSDDK AVFTVAYVVR AVSPGKYVLP QAYVEDMYNP SRYGRSSTGS VEVRPAK
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