| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2494 |
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| Symbol | |
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| ID | 3971251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2704327 |
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| End bp | 2706051 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925602 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_532364 |
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| Protein GI | 90423994 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000806623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.595086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCCA ACTCCAACAT CAAGGCGAGG TTGCCCAGCC GTCACGTGAC GGAAGGCCCG
GAGCGTGCGC CGCACCGCTC CTACCTCTAT GCGATGGGGT TGACCACGCA GCAGATCCAC
CAGCCGTTCG TCGGCGTGGC ATCGTGCTGG AATGAAGCCG CGCCCTGCAA CATCTCGCTG
ATGCGCCAGG CCCAGGCGGT GAAGAAGGGC GTCGCCGCCG CGGGTGGTAC GCCACGCGAA
TTCTGCACCA TCACCGTCAC CGACGGCATC GCCATGGGCC ATGACGGCAT GCGCTCGTCG
CTGCCGTCGC GCGAATGCAT CGCCGACTCG GTCGAGCTGA CCATCCGCGG CCACTCCTAC
GACGCGCTGG TCGGGCTTGC CGGCTGCGAC AAGTCGCTGC CCGGAATGAT GATGGCGATG
GTCCGGCTCA ACGTGCCGTC GATCTTCATC TATGGCGGCT CGATCCTGCC CGGCACCTTC
CGCGGCCAGC AGGTCACCGT GCAGGACATG TTCGAGGCGG TCGGCAAGCA TTCGGTCGGC
GCGATGTCGG ACGCCGACCT CGACGAAATC GAACGGGTGG CGTGCCCCTC GGCCGGCGCC
TGCGGCGCCC AGTTCACCGC CAACACCATG GCGACGGTGT CGGAGGCGAT CGGCCTGGCG
CTGCCTTATT CGGCCGGAGC ACCTGCGCCC TATGAGATCC GCGACGCCTT CTGCATGACC
GCCGGCGAGC AGATCATGAC GCTGATCGCC AAGAATATCC GGCCGCGCGA CATCGTCACC
TTGAAGGCGC TGCAGAACGC CGCGGCGGTG GTGGCGGCCT CCGGCGGCTC GACCAATGCG
GCGCTGCACC TGCCGGCGAT CGCGCATGAA TGCGGCATCA AATTCGACCT GTTCGACGTC
GCCGAAATCT TCAAAAAGAC ACCCTATGTC GCGGATTTGA AACCCGGCGG CCGTTATGTC
GCCAAAGACA TGTACGAAGT TGGTGGCATA CCGCTTCTGA TGAAAACATT GCTCGATCAT
GGCTACCTGC ACGGCGACTG CCTGACGGTC ACCGGCCGGA CGATTGCGGA AAATTTGGCA
ACCGTGAAAT GGAATCCCGA CCAGGACGTG GTGCGCGCAG CGGATAACCC GATCACCGTG
ACCGGTGGGG TGGTCGGGCT GCAAGGCAAC CTCGCCCCCG AGGGGGCGAT CGTGAAGGTC
GCCGGGATGT CCAACTTGAA ATTCTCCGGC CCGGCGCGCT GCTTCGATCG CGAAGAGGAC
GCCTTCGAGG CGGTGCAGCA CAAGACCTAT CGCGAAGGCG AAGTGATCGT GATCCGCTAC
GAAGGGCCGC GCGGCGGCCC CGGCATGCGC GAGATGCTGT CGACCACCGC GGCGCTGACC
GGGCAGGGCA TGGGCGGCAA GATCGCGCTG ATCACCGACG GCCGGTTCTC CGGCGCCACC
CGCGGCTTCT GCATCGGCCA TGTCGGACCG GAAGCCGCGC TCGGCGGCCC GATCGCGCTG
TTGCAGGACG GCGACATCAT CGAGATCGAC GCGGTGGCCG GCACGCTTAA CGTAAAATTG
ACCGAAGCCG AACTCTCCGC GCGCAAGACC AATTGGCAGC CGCGTGAGAC CAACCATTCG
TCAGGCGCGT TGTGGAAGTA TGCCCAACAG GTCGGCCCCG CGCTCGGTGG CGCGGTGACC
CATCCGGGTG GTTCGCACGA GAAACAGTGT TATGCGGATG TTTAA
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| Protein sequence | MDANSNIKAR LPSRHVTEGP ERAPHRSYLY AMGLTTQQIH QPFVGVASCW NEAAPCNISL
MRQAQAVKKG VAAAGGTPRE FCTITVTDGI AMGHDGMRSS LPSRECIADS VELTIRGHSY
DALVGLAGCD KSLPGMMMAM VRLNVPSIFI YGGSILPGTF RGQQVTVQDM FEAVGKHSVG
AMSDADLDEI ERVACPSAGA CGAQFTANTM ATVSEAIGLA LPYSAGAPAP YEIRDAFCMT
AGEQIMTLIA KNIRPRDIVT LKALQNAAAV VAASGGSTNA ALHLPAIAHE CGIKFDLFDV
AEIFKKTPYV ADLKPGGRYV AKDMYEVGGI PLLMKTLLDH GYLHGDCLTV TGRTIAENLA
TVKWNPDQDV VRAADNPITV TGGVVGLQGN LAPEGAIVKV AGMSNLKFSG PARCFDREED
AFEAVQHKTY REGEVIVIRY EGPRGGPGMR EMLSTTAALT GQGMGGKIAL ITDGRFSGAT
RGFCIGHVGP EAALGGPIAL LQDGDIIEID AVAGTLNVKL TEAELSARKT NWQPRETNHS
SGALWKYAQQ VGPALGGAVT HPGGSHEKQC YADV
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