| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2471 |
|---|
| Symbol | |
|---|
| ID | 3971362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2678616 |
|---|
| End bp | 2679389 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637925579 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_532341 |
|---|
| Protein GI | 90423971 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0885036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCTG CGATTCGACC GTTGATTGCC GGAAACTGGA AAATGAACGG GTTGCGGGCG
TCGCTGTCCG AACTGAAGCT GATGCTGGAA GGCGCCGGCA AGCTGTCGGC CACCGCCGAC
TTGCTGATCT GTCCGCCGGC GACGCTGGTT GCGGCATTCG CCCAGAAGCT CGCCGCCGAC
ACCGGATCGC GATCGAATTC CTTCGCCATC GGCGCACAGG ATTGCCATCC GAGAGCTTCC
GGCGCCCACA CCGGCGACAT CTCGGCGGAA ATGCTGGCGG ACGCCGGCGC CAGCGCGGTG
ATCGTCGGGC ATTCCGAGCG CCGCGCCGAC CATGGCGAGA GCGACGCCTT GGTGCGGGAG
AAGGCCGAGG CGGCCTGGCG CGCCGGGCTG GTCGCGATCA TCTGCGTCGG CGAGACGCAG
GGCCAGCGCG ACGCCGGCCA GACCCTCGAT GTGGTCGGCA CCCAGCTCGC CGGCTCGCTG
CCCGATGGCG CCACCGCCGC CAACACGGTG GTGGCTTACG AGCCGGTCTG GGCGATCGGC
ACCGGGCGCA CGCCCACGGT TGCGGATGTC GAGCAGGTTC ATGGCTTTAT CCGCAAGTCG
CTCACCCAAC GGATGAGCGG CGAGGGGAGC AAGGTTCGGA TCCTCTATGG CGGCTCGGTG
AAGCCGTCGA ACGCCCAGGA ATTGATGGCG GTGGCCGACG TCAACGGCGC GCTGGTCGGC
GGCGCCAGCC TGAAAGCCGG CGATTTTCTT GCGATTGCGG CCGGCTGTCC CTAA
|
|---|
| Protein sequence | MSAAIRPLIA GNWKMNGLRA SLSELKLMLE GAGKLSATAD LLICPPATLV AAFAQKLAAD
TGSRSNSFAI GAQDCHPRAS GAHTGDISAE MLADAGASAV IVGHSERRAD HGESDALVRE
KAEAAWRAGL VAIICVGETQ GQRDAGQTLD VVGTQLAGSL PDGATAANTV VAYEPVWAIG
TGRTPTVADV EQVHGFIRKS LTQRMSGEGS KVRILYGGSV KPSNAQELMA VADVNGALVG
GASLKAGDFL AIAAGCP
|
|---|
| |