Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2445 |
Symbol | lpxD |
ID | 3971375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2647392 |
End bp | 2648468 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637925553 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_532315 |
Protein GI | 90423945 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.197563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCAAC CATCGTTCTT CAAGCAAGGC CCTTCGTCGA CGCTGGCTGA AATCGCGGCG TTGACGAAGG CGGAATTGGT CGACGCGTCG CGCGCCGACC ATCGCATCAC CGGGGTGGCC TCGCTCGACG AAGCGGGGCC GATGCATCTC GGCTTCTTCG AAAACATCAA ATACGCCGGG CAGTTGGCGC AGACCCGCGC CGGCGCCGTT CTGGTCAGCC CGCGGTTCGA GGCCAGCGTG CCGCCGCACG TCGCGGTGCT GCGGGCCAAG AGCCCGTTTC GCGCCTTCGT CGCCTATGCG CGCCTCATCC ACCAGGACGC GATGCGGCCA CAGTCCGGCT TCGATCTCAC CGGCATCGCG GCCTCCGCGG TGATCCATCC GACCGCGCGG CTCGAGGACG GCGTCACCGT CGATCCGTTG GCGGTGATCG GTCCGCAGGT GGAAATCGGC GCCGGTTCGG TGATCGGCTC CGGCGCGGTG CTTTCGCCGG GTGTCCGGAT CGGGCGGGAC TGCAATGTCG GCGCCGGCAC GGTGATTCAA TTCGCGCTGA TCGGCAACAA CGTGCTGATC CATCCCGGCT GCCAGATCGG CCAGGACGGC TACGGTTTCA TCTTCGCCGA GACTCACCAG AAGGTGCCGC AGACCGGCCG CGTCATCATC CAGAACGACG TCGAGATCGG CGCCGGCACC ACCATCGACC GCGGCAGCCT GCGCGACACC GTGATCGGCG AGGGCAGCAA GATCGATAAT CAGGTGCAGA TCGGCCACAA TGTAACAATT GGTCGACATT GCCTGATTGC CGCGCAATGC GGACTTGCCG GAAGCCTGAC GCTCGGCGAC AACGTCGCGC TGGGCGCCAA GGTCGGGATC AACAATCATC TCCACATCGG CGATGGCGCC CAGGTGACCG CGATGAGCGC GGTCAAGGAC GACGTGCCGG CCAATGGCCG CTGGGGCGGC TACTTCGCAA AGCCGACCAA GCAATGGTTC CGCGAAATTC TCGCGGTGGA GCGCTTGCCG AAGAGCGGCG CGCCGGGCGC GGATTCAAAA GATGCGAAGG GCGAGAGGCA AGGTTGA
|
Protein sequence | MAQPSFFKQG PSSTLAEIAA LTKAELVDAS RADHRITGVA SLDEAGPMHL GFFENIKYAG QLAQTRAGAV LVSPRFEASV PPHVAVLRAK SPFRAFVAYA RLIHQDAMRP QSGFDLTGIA ASAVIHPTAR LEDGVTVDPL AVIGPQVEIG AGSVIGSGAV LSPGVRIGRD CNVGAGTVIQ FALIGNNVLI HPGCQIGQDG YGFIFAETHQ KVPQTGRVII QNDVEIGAGT TIDRGSLRDT VIGEGSKIDN QVQIGHNVTI GRHCLIAAQC GLAGSLTLGD NVALGAKVGI NNHLHIGDGA QVTAMSAVKD DVPANGRWGG YFAKPTKQWF REILAVERLP KSGAPGADSK DAKGERQG
|
| |