Gene RPC_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2386 
Symbol 
ID3971522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2587921 
End bp2589330 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID637925492 
Productglutamine synthetase, type I 
Protein accessionYP_532257 
Protein GI90423887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.35436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.41443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CTAAAGAAGT CCTGCAATCG ATCAAGGACA ACGACGTGAA ATACGTCGAT 
CTGCGTTTCA CCGATCCGCG CGGCAAGTGG CAGCACGTCA CCTTCGACGT CTCGATGATC
GACGAGGACA TTTTCGCCGA AGGCACCATG TTCGACGGTT CCTCGATCGC CGGCTGGAAG
GCGATCAACG AATCCGACAT GATGCTGATG CTCGATCCGT CGACCGCGAC GATCGACCCG
TTCTTCGCAG AGACCACCAT GGTGATCACC TGCGACATTC TCGAGCCCTC GACCGGCGAG
CCCTACAACC GCGACCCCCG CGGCATCGCC AAGAAGGCCG AAGCCATGGT CAAGTCGATG
GGCATCGGCG ACACCGTGAT GGTCGGCCCG GAAGCCGAAT TCTTCGTGTT CGACGACGTG
CGCTACCAGA CCACCCCCTA CAACACCGGC TTCAAGCTCG ACTCCTCGGA ACTGCCGATC
AATTCCGACA CCGAATATGA GGGCGGCAAT CTCGGCCACC GCATCCGCAC CAAGGCTGGC
TACTTCCCGG TGCCGCCGCA GGACTCGGTG CAGGACATGC GCTCGGAAAT GCTCGGCGCG
ATGGCCAAGA TGGGCGTCAA GGTCGAAAAG CATCACCACG AAGTCGCGTC CGCCCAGCAC
GAGCTCGGCA TGAAGTTCGA CACCCTGACC CACATGGCCG ACCAGATGCA GATCTACAAG
TACTGCATCC ACCAGGTCGC GCACATCTAC GGCAAGACCG CCACCTTCAT GCCGAAGCCG
GTGTTCGGCG ACAACGGCTC GGGCATGCAC GTGCATCAGT CGATCTGGAA GGACGGCAAG
CCGGTGTTCG CCGGTAACAA GTACGCCGAC CTCTCGGAAA CCTGCCTGCA CTACATCGGC
GGCATCATCA CCCACGCCAA GGCGATCAAC GCCTTCACCA ACCCGTCGAC CAACTCCTAC
AAGCGTCTGG TCCCGGGCTA TGAAGCCCCG GTGTTGCTGG CCTATTCGGC CCGCAACCGG
TCGGCCTCCT GCCGCATCCC CTACACCACC TCGCCGAAGG CCAAGCGCGT CGAAGTCCGC
TTCCCGGACC CGATGGCCAA CCCGTATCTC GGCTTCGCCG CGATGCTGAT GGCCGGCCTC
GACGGCATCA AGAACAAGAT CGATCCGGGT CCGGCGATGG ACAAGGACTT GTACGACCTG
CCGAAGGAAG AGCTGAAGTC GATCCCGACG GTGTGCGGTT CGCTCCGCGA AGCGCTGGAA
AACCTCGACA AGGACCGCGG CTTCCTGAAG GCCGGCGGGG TGTTCGACGA CGACTTCATC
GACGCCTATA TCGAACTGAA GATGACCGAA GTGATGCGTT TCGAAATGAC GCCGCACCCG
GTGGAATTCG ACATGTACTA CTCGCAGTGA
 
Protein sequence
MTTAKEVLQS IKDNDVKYVD LRFTDPRGKW QHVTFDVSMI DEDIFAEGTM FDGSSIAGWK 
AINESDMMLM LDPSTATIDP FFAETTMVIT CDILEPSTGE PYNRDPRGIA KKAEAMVKSM
GIGDTVMVGP EAEFFVFDDV RYQTTPYNTG FKLDSSELPI NSDTEYEGGN LGHRIRTKAG
YFPVPPQDSV QDMRSEMLGA MAKMGVKVEK HHHEVASAQH ELGMKFDTLT HMADQMQIYK
YCIHQVAHIY GKTATFMPKP VFGDNGSGMH VHQSIWKDGK PVFAGNKYAD LSETCLHYIG
GIITHAKAIN AFTNPSTNSY KRLVPGYEAP VLLAYSARNR SASCRIPYTT SPKAKRVEVR
FPDPMANPYL GFAAMLMAGL DGIKNKIDPG PAMDKDLYDL PKEELKSIPT VCGSLREALE
NLDKDRGFLK AGGVFDDDFI DAYIELKMTE VMRFEMTPHP VEFDMYYSQ