| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2370 |
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| Symbol | |
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| ID | 3971542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2570641 |
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| End bp | 2571675 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925477 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_532242 |
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| Protein GI | 90423872 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.972198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCC GCCTCAAGAT CATCATCCCG ATCGTCGTGA TCGCGCTCGC CGGCGCCGCC
GGCGCGTGGT GGTGGACGAG CCACCGTGGC GACGACGACG TGCTCACCTT GCAGGGCAAC
GTCGAGGTCC GCCAGGTCAA TCTCGGCTTC AAGGTGTCCG GCCGGATCGC CGCGCTCAAC
GTCGACGAAG GCGCCCGGGT CGAAGCCGGC GACAAACTCG CCTCGCTGGA TGCGGTGTAT
TTCGAAGACA ATCTGCGGCA GATGCGGGCG CAACGCGATC AGGCCGCCGC CAATTTGGCC
AAGATGATCG CCGGCAACCG GCCGCAGGAA ATCGCCCAGG CCGAAGCTTT GGTCAGCGAG
CGCGAAGCCG CCAGCGCCAA TGCCAAGGTC AGTCTCGACC GCGCCACCCA ATTGCTGAAA
TCCGCCGCCG GCACGCAAAA GACCTATGAC GACGCCGCGG CGCTGAACCG CCAGACCACG
GCGCAGCTGG CGTCGGCCAA CGAAGCACTG CGGCTGATGA AGGCCGGCTT CCGCGAGGAG
GATATCGACC TCGCCCGCGC CCAGCTCGCC GACAAGGACG CCGCGCTCCG GATCGCCGAG
CGGCAGCGGA TCGACGCCGA CCTGCTGGCG CCGACCGCGG GCGTGGTGTT GAGCCGGGTG
CGCGAACTCG GCGCCATCGT CAACGCCGGC GAGACGGTGT TCGTGCTCAG CCTCACCACC
CCGGTGTGGG TGCGCAGCTA CGTCTCCGAG CAGGAGCTCG GCCGCATCAA GCCCGGCATG
GCGGTCGAGC TGCACTCCGA CACGACGCAG ATCAAGCCCT TGAAGGGCAC CGTCGGCTTC
ATCTCCACCA CCGCGGAATT CACCCCGAAG ACGGTGGAAA CCCGCGAGCT GCGCACCGCG
CTGGTGTACC GGATCCGCGT CGTCACCGAC GATCCCGACA ACGTGCTGCG CCAGGGCATG
CCGATGACGA TCATCGCCCA CCCCGACGCC GCCACCAAGC CCGCAGCGGG CATCCCCTCC
GCCGAGGCGA AATAG
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| Protein sequence | MTPRLKIIIP IVVIALAGAA GAWWWTSHRG DDDVLTLQGN VEVRQVNLGF KVSGRIAALN
VDEGARVEAG DKLASLDAVY FEDNLRQMRA QRDQAAANLA KMIAGNRPQE IAQAEALVSE
REAASANAKV SLDRATQLLK SAAGTQKTYD DAAALNRQTT AQLASANEAL RLMKAGFREE
DIDLARAQLA DKDAALRIAE RQRIDADLLA PTAGVVLSRV RELGAIVNAG ETVFVLSLTT
PVWVRSYVSE QELGRIKPGM AVELHSDTTQ IKPLKGTVGF ISTTAEFTPK TVETRELRTA
LVYRIRVVTD DPDNVLRQGM PMTIIAHPDA ATKPAAGIPS AEAK
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