Gene RPC_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2360 
Symbol 
ID3969071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2561156 
End bp2561908 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID637925467 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_532232 
Protein GI90423862 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.388249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATT CTTATCCGCG ACATCTCGCG CTGACCGGCG CCTGCAATTT CCGCGATCTC 
GGCGGCTATC CGGGCAAGGA CGGCCGCGGC GTGCGCTGGC GGCAGCTGTT TCGCTCCAAT
CATCTGGCGC ACCTGAGCTG CGACGACATC GCGCTGCTGC GCAGCCTCGG CCTGAAGAAC
GCGTTCGATC TGCGCGGCGT CGAGGAGCGG CTCAGCACGA TGTGCTGCGT CGACGATATC
ACCGTACATT CGCTGCCGAT CGAGCCCGCG ATCATGCTGG CGCTGCGCGA GCGCATCCTC
AGCCGCGTGC CGCTGTCCGC CGCAGAGACC GCGGAGTTGA TGCGCGACTC CTATCGCGAT
TTCGTGCGCA ACAACACCAA GGCGTTCCAT GCGTTGTTCG CGCATCTGCT GGAAGATCAC
GCGCCGCTGG TGATTCACTG CACCGCCGGC AAGGACCGCA CCGGATTCGC CTGCGCGCTG
ATCCTGCACG CGCTCGGCGT CGCCGAGCCC ACCATCGTCG AAGACTATCT GCTGACCAAC
CGGCACTACC GGCTCGATGA CGCGACGGCG AAGACCCTTG CGTTGCCGGC CGAGATCACC
GCTGTTCTGG TGTCGGTGGA GGACTCGTTC CTGGCCGCGG CGTTCGAGGC CGTGCGCGCC
GATTATGGCG ATCTCGAAAC CTACTTTGCC GATGGGCTCG GCGTTGGCCG CGCGCAACGT
GCCGAGCTCG AGGCGCGCTA TCTGGAGCGA TAG
 
Protein sequence
MLDSYPRHLA LTGACNFRDL GGYPGKDGRG VRWRQLFRSN HLAHLSCDDI ALLRSLGLKN 
AFDLRGVEER LSTMCCVDDI TVHSLPIEPA IMLALRERIL SRVPLSAAET AELMRDSYRD
FVRNNTKAFH ALFAHLLEDH APLVIHCTAG KDRTGFACAL ILHALGVAEP TIVEDYLLTN
RHYRLDDATA KTLALPAEIT AVLVSVEDSF LAAAFEAVRA DYGDLETYFA DGLGVGRAQR
AELEARYLER