Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2345 |
Symbol | |
ID | 3972186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2551403 |
End bp | 2551945 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637925452 |
Product | CreA |
Protein accession | YP_532217 |
Protein GI | 90423847 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00745568 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.221071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGTTC GAGCCCCTCG CATTTCCCAT TTGAAGACCT GGACACTCGC TGCGCTCGCC TTTGCGTTGC TGTCGGGGTC GGTGGCCAGC GCCGCAGAAG AACCCGACCT GATCTTCCGG CGCTCCACCG TCTTCAAATG GCTGAGCCCG AACGACAAGC TCGCCACCTA TGCGCTCGAC GATCCGGAAG TGGAGGGCGT CGCCTGCCAT TTCACGGTGC CGGAGCGCGG CGGGTTCAAG GGATGGCTGG GATTGGCCGA AGAGGTGTCG GACATCTCGT TGGCCTGCCG TCAGGTCGGC CCGATCCGCT TTAAAGACAA GATGGAGCAG GGCGAAGACA TGTTCCAGAA GAAACGCTCG TTGTTCTTCA AGAAGATGCA GATCGTGCGG GGTTGCGACA TCAAGCGAAA CGTGCTGGTC TACATGGTGT ATTCGGACCG CATCATCGAA GGCTCGCCGA AAAATTCGAC CTCGTCGGTG CCGGTGATGC CGTGGGGCGC GGGCGACGCG GCCGTTCAGA AATGCGCCGA CTTCTTCAAG TAA
|
Protein sequence | MTVRAPRISH LKTWTLAALA FALLSGSVAS AAEEPDLIFR RSTVFKWLSP NDKLATYALD DPEVEGVACH FTVPERGGFK GWLGLAEEVS DISLACRQVG PIRFKDKMEQ GEDMFQKKRS LFFKKMQIVR GCDIKRNVLV YMVYSDRIIE GSPKNSTSSV PVMPWGAGDA AVQKCADFFK
|
| |