Gene RPC_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2345 
Symbol 
ID3972186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2551403 
End bp2551945 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID637925452 
ProductCreA 
Protein accessionYP_532217 
Protein GI90423847 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00745568 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.221071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC GAGCCCCTCG CATTTCCCAT TTGAAGACCT GGACACTCGC TGCGCTCGCC 
TTTGCGTTGC TGTCGGGGTC GGTGGCCAGC GCCGCAGAAG AACCCGACCT GATCTTCCGG
CGCTCCACCG TCTTCAAATG GCTGAGCCCG AACGACAAGC TCGCCACCTA TGCGCTCGAC
GATCCGGAAG TGGAGGGCGT CGCCTGCCAT TTCACGGTGC CGGAGCGCGG CGGGTTCAAG
GGATGGCTGG GATTGGCCGA AGAGGTGTCG GACATCTCGT TGGCCTGCCG TCAGGTCGGC
CCGATCCGCT TTAAAGACAA GATGGAGCAG GGCGAAGACA TGTTCCAGAA GAAACGCTCG
TTGTTCTTCA AGAAGATGCA GATCGTGCGG GGTTGCGACA TCAAGCGAAA CGTGCTGGTC
TACATGGTGT ATTCGGACCG CATCATCGAA GGCTCGCCGA AAAATTCGAC CTCGTCGGTG
CCGGTGATGC CGTGGGGCGC GGGCGACGCG GCCGTTCAGA AATGCGCCGA CTTCTTCAAG
TAA
 
Protein sequence
MTVRAPRISH LKTWTLAALA FALLSGSVAS AAEEPDLIFR RSTVFKWLSP NDKLATYALD 
DPEVEGVACH FTVPERGGFK GWLGLAEEVS DISLACRQVG PIRFKDKMEQ GEDMFQKKRS
LFFKKMQIVR GCDIKRNVLV YMVYSDRIIE GSPKNSTSSV PVMPWGAGDA AVQKCADFFK