Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2334 |
Symbol | |
ID | 3972175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2536559 |
End bp | 2537713 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925441 |
Product | ribonuclease D |
Protein accession | YP_532206 |
Protein GI | 90423836 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.323596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA TCACCACCAC CGACCAACTC GCCGCGGTTT GCGACCGCCT TGCCAAGCAC CCGGCGATTA CCGTCGACAC CGAGTTTCTC CGCGAGACCA CCTACTATCC GCTGCTCTGC GTGGTGCAGA TGGCGAGCGC CGAGGACGCC GTGGTGGTCG ATACCCTGGC GCCGGGCATC GACCTCAAGC CGTTCTTCGA TCTGATGGCG AATGACGACG TGCTGAAGGT GTTTCATGCC GCCCGGCAGG ACATCGAAAT CGTCTGGCAC CGCGCCGGCA TCGTGCCGCA TCCGATCTTC GACACCCAGG TCGCCGCGAT GGTGCTGGGC TATGGCGACT CCATCGCCTA CGACCAGCTG GTCGAGCGCA TCACCGGCCA CCGCCCCGAC AAGACCCACC GTTTTACCGA TTGGGCGCGC CGGCCTTTGA CCGATGAGCA GCTGCATTAC GCGGTGTCCG ACGTCACCCA TCTGCGCGAC GTGTTCGCCG CCCTCGACGC CGACCTGAAG AAGCGCGGCC GCAGCGACTG GGTCAGCGAG GAGATGGAAG TCCTCACCTC GCCCAAGACC TACGACTTCC ACCCCGAACG CGCCTGGGAG CGGCTGAAGA CCCGGGTGCG CAAGCCGAAA GAGCTGGCGG TGCTGATGGA AGTCGCGGCC TGGCGCGAGC AGGAAGCGCA GAGCCGCGAC GTGCCGCGCT CGCGCGTGCT GAAGGACGAC ACCGTCGGCG ACATCGCCAC CCATGCGCCG ACCAGCCTGG AGCGGCTGGC CGGGCTGCGC TCGCTGCCGA AGGGATTCGA TCGCTCGAAA TGGGGCGCCG ATATCGTCGC GGCGGTGCAG CGCGGCCTCG CCCGCGATCC CGCCACCCTG CCGAAGATCG AGAAGCCGCG CGGCAACGGC AATGGTGCGG CAATCGTCGA ATTGTTGAAG GTGCTGCTGC GGATGACCTC GGAGCGCCAC GCCGTCGCCA GCAAGGTGAT CGCCACGGTG GACGATCTCG AGCAGATCGC CGCCGACGAC CATGCCGACG TCGGCGCGCT GCAGGGCTGG CGCCGCGAAC TGTTCGGCGA GGCCGCCCTC GCCCTCAAGC AGGGCCGGCT CGCATTGGCG ATCGAAAAAG GCAAAGTGGT GCGGGTCGAG CGAACCGAGG TTTAG
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Protein sequence | MDLITTTDQL AAVCDRLAKH PAITVDTEFL RETTYYPLLC VVQMASAEDA VVVDTLAPGI DLKPFFDLMA NDDVLKVFHA ARQDIEIVWH RAGIVPHPIF DTQVAAMVLG YGDSIAYDQL VERITGHRPD KTHRFTDWAR RPLTDEQLHY AVSDVTHLRD VFAALDADLK KRGRSDWVSE EMEVLTSPKT YDFHPERAWE RLKTRVRKPK ELAVLMEVAA WREQEAQSRD VPRSRVLKDD TVGDIATHAP TSLERLAGLR SLPKGFDRSK WGADIVAAVQ RGLARDPATL PKIEKPRGNG NGAAIVELLK VLLRMTSERH AVASKVIATV DDLEQIAADD HADVGALQGW RRELFGEAAL ALKQGRLALA IEKGKVVRVE RTEV
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