Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2313 |
Symbol | |
ID | 3973271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2514701 |
End bp | 2515867 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925421 |
Product | permease YjgP/YjgQ |
Protein accession | YP_532186 |
Protein GI | 90423816 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTCAA TCGACAGCTA CATTTTCCGC ACGACGCTGA CGTCGTTTGC GGTGATCCTG GCCAGCCTCA CCGGCGTGAT CTGGATTACC CAAGCGTTGC GCGGAATCGA CCTGATGACG AGCCAAGGTC AGACCATCCT GACCTTTCTC GGCCTCACCG GCATGGCGGT TCCGGTTCTG GTGCTGGTGA TCGCCCCGAT CGCGCTGATG ATCGCGGTGG CCCACACCCT GAACCGGCTG GCCAATGATT CGGAAATCAT CGTGATGAAT GCCGCGGGGC TGTCGCCGCT GCGGCTGGTG CGCCCCTTCA TGTTTGCTTC GGTGGTGGTG GCGATTCTGG TCGGCTTCAT CTCGGCCTAT GTCGCGCCCG AGGGGCTGCG CCGGATCAAC CGCTGGGACA GCGAGATCAC CGCCGACATC CTGGCCAATA TCCTGCAGCC TGGCCGGTTC TCGCAACTCG AAACCAATCT GACGATCAGG GTGCGGGAGC GGCAGCCCGG CGGCGTGCTG GTCGGGGTGT TCATCGACGA TCGCCGTGAT CCGAACGAGC GGATCAGCAT CATCGCCGAC CATGGCACGG TGCTGAAGAA CAACGACGGC TCGTTCCTGG TGCTCGAAGA CGGCACGCTG CAGCGCTTCG AATCGGGCAA ACGCGACCCC GCGCTGGTGG CGTTCGGCCG CTACGCCTTC GACATGTCGA AGTTTTCCCG GGCCCGCGAC GTCTCCTACG GCATCCGCGA GCGCTATCTG TGGGAATTGC TGTGGCCGGA GCCCGATGAT GCGCTGTACG CCCGCTTGCC CAACCAGTTC CGCGCCGAGA TGCACGACCG CGTGCTGGCG CCGATCTATC CGTTCGTGTT CGCAGCGCTG ACTTTCGCGT TCCTGGGCTT GCCGCGCACC ACGCGGCAGA GCCGGAATTT TTCCATGGCC GGCGCGATTG CGGCGGTGTT CGTGGTGCGG CTGGCCGGAT TCGCCTGCTC GATCGTGGCC AGCAGCACGC CGGCGGTCGC CATCGCCCAG TATCTGCTGC TGGCGGCGGC GCTGGCGGGA AGTCTGTGGG TGATCGCGCG CAACATCGTC ATCGAGCCGC CGGCCCGGTT GATGGAGCTC CTCAACGCGC TGTCGGCGTC GATCGCCCGC CTCCGACTGC GTCCGATGCC GTCATGA
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Protein sequence | MGSIDSYIFR TTLTSFAVIL ASLTGVIWIT QALRGIDLMT SQGQTILTFL GLTGMAVPVL VLVIAPIALM IAVAHTLNRL ANDSEIIVMN AAGLSPLRLV RPFMFASVVV AILVGFISAY VAPEGLRRIN RWDSEITADI LANILQPGRF SQLETNLTIR VRERQPGGVL VGVFIDDRRD PNERISIIAD HGTVLKNNDG SFLVLEDGTL QRFESGKRDP ALVAFGRYAF DMSKFSRARD VSYGIRERYL WELLWPEPDD ALYARLPNQF RAEMHDRVLA PIYPFVFAAL TFAFLGLPRT TRQSRNFSMA GAIAAVFVVR LAGFACSIVA SSTPAVAIAQ YLLLAAALAG SLWVIARNIV IEPPARLMEL LNALSASIAR LRLRPMPS
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