Gene RPC_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2313 
Symbol 
ID3973271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2514701 
End bp2515867 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID637925421 
Productpermease YjgP/YjgQ 
Protein accessionYP_532186 
Protein GI90423816 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCAA TCGACAGCTA CATTTTCCGC ACGACGCTGA CGTCGTTTGC GGTGATCCTG 
GCCAGCCTCA CCGGCGTGAT CTGGATTACC CAAGCGTTGC GCGGAATCGA CCTGATGACG
AGCCAAGGTC AGACCATCCT GACCTTTCTC GGCCTCACCG GCATGGCGGT TCCGGTTCTG
GTGCTGGTGA TCGCCCCGAT CGCGCTGATG ATCGCGGTGG CCCACACCCT GAACCGGCTG
GCCAATGATT CGGAAATCAT CGTGATGAAT GCCGCGGGGC TGTCGCCGCT GCGGCTGGTG
CGCCCCTTCA TGTTTGCTTC GGTGGTGGTG GCGATTCTGG TCGGCTTCAT CTCGGCCTAT
GTCGCGCCCG AGGGGCTGCG CCGGATCAAC CGCTGGGACA GCGAGATCAC CGCCGACATC
CTGGCCAATA TCCTGCAGCC TGGCCGGTTC TCGCAACTCG AAACCAATCT GACGATCAGG
GTGCGGGAGC GGCAGCCCGG CGGCGTGCTG GTCGGGGTGT TCATCGACGA TCGCCGTGAT
CCGAACGAGC GGATCAGCAT CATCGCCGAC CATGGCACGG TGCTGAAGAA CAACGACGGC
TCGTTCCTGG TGCTCGAAGA CGGCACGCTG CAGCGCTTCG AATCGGGCAA ACGCGACCCC
GCGCTGGTGG CGTTCGGCCG CTACGCCTTC GACATGTCGA AGTTTTCCCG GGCCCGCGAC
GTCTCCTACG GCATCCGCGA GCGCTATCTG TGGGAATTGC TGTGGCCGGA GCCCGATGAT
GCGCTGTACG CCCGCTTGCC CAACCAGTTC CGCGCCGAGA TGCACGACCG CGTGCTGGCG
CCGATCTATC CGTTCGTGTT CGCAGCGCTG ACTTTCGCGT TCCTGGGCTT GCCGCGCACC
ACGCGGCAGA GCCGGAATTT TTCCATGGCC GGCGCGATTG CGGCGGTGTT CGTGGTGCGG
CTGGCCGGAT TCGCCTGCTC GATCGTGGCC AGCAGCACGC CGGCGGTCGC CATCGCCCAG
TATCTGCTGC TGGCGGCGGC GCTGGCGGGA AGTCTGTGGG TGATCGCGCG CAACATCGTC
ATCGAGCCGC CGGCCCGGTT GATGGAGCTC CTCAACGCGC TGTCGGCGTC GATCGCCCGC
CTCCGACTGC GTCCGATGCC GTCATGA
 
Protein sequence
MGSIDSYIFR TTLTSFAVIL ASLTGVIWIT QALRGIDLMT SQGQTILTFL GLTGMAVPVL 
VLVIAPIALM IAVAHTLNRL ANDSEIIVMN AAGLSPLRLV RPFMFASVVV AILVGFISAY
VAPEGLRRIN RWDSEITADI LANILQPGRF SQLETNLTIR VRERQPGGVL VGVFIDDRRD
PNERISIIAD HGTVLKNNDG SFLVLEDGTL QRFESGKRDP ALVAFGRYAF DMSKFSRARD
VSYGIRERYL WELLWPEPDD ALYARLPNQF RAEMHDRVLA PIYPFVFAAL TFAFLGLPRT
TRQSRNFSMA GAIAAVFVVR LAGFACSIVA SSTPAVAIAQ YLLLAAALAG SLWVIARNIV
IEPPARLMEL LNALSASIAR LRLRPMPS