| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2280 |
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| Symbol | |
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| ID | 3971607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2479300 |
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| End bp | 2480559 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925388 |
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| Product | major facilitator transporter |
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| Protein accession | YP_532153 |
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| Protein GI | 90423783 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.398896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.849447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCG AACAGCCTGT CGCGGAGGCC ATCGCGACGC CTCCCATAGA AGGGCCGCGC
CGCGCCGCGG TCGGCTTCAT CTTCATCACT ATCCTGCTCG ACATGCTGTC GATCGGCATG
ATCCTGCCGA TCCTGCCGAA GCTGGTGGAG AGCTTCGCCG ACAACAACAC CGCGGACGCC
GCAACAATCT ACGGCCTGTT CGGCACCGCC TGGGCGTTGA TGCAGTTCTT CGCCTCGCCG
GTGCTCGGCG CGCTGAGCGA CCGGTTCGGC CGCCGCCCGG TGATCCTGTT GTCGAATTTC
GGGCTCGGGC TCGACTACAT CATGATGGCG CTGGCGCCGT CGCTGATCTG GCTGTTCGTC
GGCCGGATGA TTTCCGGCGT CACCTCGGCG AGCATTTCGA CCTCGTTCGC CTATATCGCC
GACGTCACGG CGCCGGAGAA ACGCGCCGCG GTGTTCGGCA AGATCGGGGC GGCGTTCGGG
CTCGGCTTCA TCTTCGGCCC GGCGATCGGC GGACTGCTCG GCGGCGTCGA TCCGCGGCTG
CCGTTCTGGG TCGCCGCCGG GCTCAGCCTC GCCAACGCGA TGTACGGCTA CTTCGTATTG
CCGGAATCGC TGCCGAAAGA GCGCCGCTCG CCGTTCAAAT GGCGCAGCGC CAACCCGCTC
GGCGCGCTGC GGCTGCTGCG CTCCAACGCC ACGCTGGCGG CGCTCGCCGT GGTGACGTTC
TGCGCCGAGG TGGCGCATGT CGCGCTGCCG GCGACCTTCG TGCTCTACAC CACCTATCGT
TACGGATGGG ACCAGACCAC GGTCGGGCTG GCGCTGGCCT TCGTCGGACT ATGCACCACC
ATCGTGCAGG GCGGGCTGGT CGGGCCGTCG CTGAAGCTGC TCGGCGAGCG CTGGGCGATG
ATTCTTGGCT ATGGCGGCGG CGCGCTCGGC TTTGCGATCT ACGCGTTCGC GCCGAACGGG
CCGCTGTTCT GGATCGGCAT CCCGGTGATG ACGATCTGGG GCATCGCCGG ACCCGCGACC
TCGAGCCTGA TGACGCGGCT GGTGCCGGCG GACCAGCAGG GCCAGTTGCA GGGCGCCAAC
ACCAGCGTCA ACAGCGTCGC CGAACTGGTC GGCCCGTCGC TGTTCACGCT GATCTTCGCG
TTCTTCATCG CCGATGGCAC GCCGCTGCAT CTGCCCGGCG CGCCGTTCAT TGTGGCGGGT
GCGCTGTTGC TGGTGTCGAT GCTGATCGCA GGCAGCGCGG TGGCGGCGAT GAACAGGTAG
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| Protein sequence | MTVEQPVAEA IATPPIEGPR RAAVGFIFIT ILLDMLSIGM ILPILPKLVE SFADNNTADA
ATIYGLFGTA WALMQFFASP VLGALSDRFG RRPVILLSNF GLGLDYIMMA LAPSLIWLFV
GRMISGVTSA SISTSFAYIA DVTAPEKRAA VFGKIGAAFG LGFIFGPAIG GLLGGVDPRL
PFWVAAGLSL ANAMYGYFVL PESLPKERRS PFKWRSANPL GALRLLRSNA TLAALAVVTF
CAEVAHVALP ATFVLYTTYR YGWDQTTVGL ALAFVGLCTT IVQGGLVGPS LKLLGERWAM
ILGYGGGALG FAIYAFAPNG PLFWIGIPVM TIWGIAGPAT SSLMTRLVPA DQQGQLQGAN
TSVNSVAELV GPSLFTLIFA FFIADGTPLH LPGAPFIVAG ALLLVSMLIA GSAVAAMNR
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