| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2239 |
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| Symbol | |
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| ID | 3973256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2443522 |
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| End bp | 2446290 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925347 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_532112 |
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| Protein GI | 90423742 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0515029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0535493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG TCATTGTCGA GTCGCCTGCG AAGGCCAAGA CGATCAACAA ATATCTGGGC
AGTTCCTACG AGGTTCTGGC CTCGTTCGGC CATGTCCGCG ACCTTCCGGC GAAGAACGGC
TCGGTCGATC CCGACGCCAA TTTCCAGATG ATCTGGGAAA TCGATCCCAA GGCCGCCGGC
CGGCTCAACG ACATCGCCAA GGCGCTGAAG GGCGCCGACA AGCTGATCCT CGCAACCGAC
CCTGATCGCG AGGGGGAAGC GATCTCCTGG CACGTGCTGG AGGTGTTGAA AGAGAAGCGC
GCGATCAAGG ATCACAAGAT CGAACGCGTG GTGTTCAACG CCATCACCAA GCAGGCGGTC
ACCGATGCGA TGAAGAACCC GCGCCAGATC GACGGCGCGC TGGTCGACGC CTATATGGCG
CGCCGCGCGC TGGACTATCT GGTCGGCTTT ACACTCTCTC CCGTATTGTG GCGCAAACTG
CCCGGCGCCC GCTCCGCCGG CCGCGTCCAA TCGGTGGCGC TGCGGCTGGT CTGCGACCGC
GAGCTCGAGA TCGAGAAATT CGTGCCGCGG GAATACTGGT CGCTGGTGGC GACCCTGACC
ACGCCGCGCG GCGAGATGTT CGAGGCCCGG CTCACCGGCG CCGATGGCAA GAAGATCCAG
CGGCTCGACA TCGGCACCGG CGCCGAGGCC GAGGATTTCA AGCAGGCGAT CGAAGCGGCG
CTGTTCAATG TCGCCAGCGT CGAAGCCAAG CCGGCGCGGC GCAACCCCTA CGCGCCGTTC
ACCACCTCGA CGCTGCAGCA GGAGGCCAGC CGCAAGCTCG GCTTCGCCCC GGCGCACACC
ATGCGGATCG CGCAGCGGTT GTATGAAGGC ATCGACATCG GCGGCGAGAC CACCGGTCTC
ATTACTTATA TGCGTACCGA CGGCGTGCAG ATTGATTCCT CCGCCATCAC CCAGGCGCGC
CAGGTGATCG GCGAGGACTA CGGCAAGCAA TACGTTCCGG AGGCGCCGCG GCAATACACC
GCCAAGGCCA AGAACGCCCA GGAAGCCCAT GAAGCGATCC GGCCGACCGA CCTCAGCCGC
CGCCCCGCCA GCTTGCGCGC CCGGCTCGAC CACGATCAGA TCCGGCTCTA CGAGCTGATC
TGGATCCGCA CCATCGCCAG CCAGATGGAA TCCGCCGAAT TGGAGCGCAC CACCGTCGAG
ATCGCCGCCA AGGCGGGCTC GCGGGTGCTG GAACTGCGCG CCACCGGCCA GGTGGTGAAG
TTCGACGGCT TCCTGGCGGT GTATCAGGAA GGCCGCGACG ACGACGGTGA CGACGAGGAT
TCCCGCCGAC TGCCGGCAAT GAGCCAAGGC GAAGCCTTGG CTCGCAAGGA CCTCGCCGTC
ACCCAGCATT TCACCGAGCC GCCGCCGCGC TTCTCCGAAG CCTCGCTGGT CAAGCGGATG
GAAGAGCTCG GCATCGGCCG GCCCTCGACC TACGCCTCGA TCCTGCAGGT GTTGAAGGAC
CGCGGCTACG TCAAGCTCGA CAAGAAGCGG CTGCACGCCG AGGACAAGGG CCGCGTCGTG
GTCGCGTTCC TGGAGAACTT CTTCGCCCGC TACGTCGAAT ACGACTTCAC CGCGGCGCTG
GAGGAAAACC TCGACCGGAT TTCCAACAAC GAAATCTCCT GGCAACAGGT GCTGCGCGAT
TTCTGGACCG ACTTCATCGG CGCGGTCAAC GACATCAAGG ATCTGCGCGT CGCGCAGGTG
CTGGACGCGC TCGACGACAT GCTCGGCTCG CACATCTATG CGCCACGCGA CGACGGCGGC
GATCCGCGGC AATGCCCGAG CTGCGGCACC GGCAAGCTCA ACCTCAAGGC CGGCAAGTTC
GGCGCCTTCG TCGGCTGCAG CAACTATCCG GAATGCCGCT ACACCCGCCC GTTGGCGGCT
GACGGCGGCG GCGACGGCGA CCGCATTCTC GGCAAGGACC CGGTGTCCGG CCTCGAAGTC
GCGGTCAAGG CCGGCCGGTT CGGTCCCTAT ATCCAGCTCG GTGACGCCAA GGACTACGCC
GAGGGCGAGA AGCCGAAACG CGCCGGCATT CCGAAAAACT CCTCGCCCGG CGACATGGAG
CTCGAGCTCG CGCTGAAGCT GTTGTCGCTG CCGCGCGAAG TCGGCAAACA TCCGGAGACC
GGCGAGCCGA TCAAGGCCGG CATCGGCCGC TTCGGTCCCT ATGTGCAGCA TGAGAAGACC
TATGCCAGCC TGGAAGCTGG CGACGAGGTG TTCGACATCG GGCTGAACCG CGCGGTGACG
CTGATCGCCG AGAAGATCCT CAAAGGCCCG AGCAAGCGAC GGTTTGGTTC GGACCCCGGC
AAACCGCTCG GCGAGCATCC CTCGCTCGGC ACCGTGGCGG TGAAGAGCGG ACGTTACGGC
GCTTACGTCA CCGCCGGCGG CGTCAACGCC ACGATTCCGA GCGACAAAAC TCAAGAGAGC
ATCACCCTGC CCGAGGCCAT CGCGCTGATC GACGAGCGCG CGGCGAAGGG CGGCGGCAAG
CCGAAGAAAG CCGCGAAGAA AGCGCCGGCC AAGAAGGCCG CGAAGTCCGA TACCGACGCA
GCGGCAGAGA CGAAAAAACC CGCGAAGAAA GCCGCGGCGA AGAAGTCGGT CGCCAAGCCG
AAGGCCGACG GCGTCGCCGT AAGTGCCGCG CGCGCGCCGG CGAAAGCCAA ATCCTCGACC
AAGACCGCCG CAGCCAAGAA GCCTGCAAAG CCGGCGGCGA AAAAATCCGC GGGCAAAGCC
AACGGCTGA
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| Protein sequence | MNIVIVESPA KAKTINKYLG SSYEVLASFG HVRDLPAKNG SVDPDANFQM IWEIDPKAAG
RLNDIAKALK GADKLILATD PDREGEAISW HVLEVLKEKR AIKDHKIERV VFNAITKQAV
TDAMKNPRQI DGALVDAYMA RRALDYLVGF TLSPVLWRKL PGARSAGRVQ SVALRLVCDR
ELEIEKFVPR EYWSLVATLT TPRGEMFEAR LTGADGKKIQ RLDIGTGAEA EDFKQAIEAA
LFNVASVEAK PARRNPYAPF TTSTLQQEAS RKLGFAPAHT MRIAQRLYEG IDIGGETTGL
ITYMRTDGVQ IDSSAITQAR QVIGEDYGKQ YVPEAPRQYT AKAKNAQEAH EAIRPTDLSR
RPASLRARLD HDQIRLYELI WIRTIASQME SAELERTTVE IAAKAGSRVL ELRATGQVVK
FDGFLAVYQE GRDDDGDDED SRRLPAMSQG EALARKDLAV TQHFTEPPPR FSEASLVKRM
EELGIGRPST YASILQVLKD RGYVKLDKKR LHAEDKGRVV VAFLENFFAR YVEYDFTAAL
EENLDRISNN EISWQQVLRD FWTDFIGAVN DIKDLRVAQV LDALDDMLGS HIYAPRDDGG
DPRQCPSCGT GKLNLKAGKF GAFVGCSNYP ECRYTRPLAA DGGGDGDRIL GKDPVSGLEV
AVKAGRFGPY IQLGDAKDYA EGEKPKRAGI PKNSSPGDME LELALKLLSL PREVGKHPET
GEPIKAGIGR FGPYVQHEKT YASLEAGDEV FDIGLNRAVT LIAEKILKGP SKRRFGSDPG
KPLGEHPSLG TVAVKSGRYG AYVTAGGVNA TIPSDKTQES ITLPEAIALI DERAAKGGGK
PKKAAKKAPA KKAAKSDTDA AAETKKPAKK AAAKKSVAKP KADGVAVSAA RAPAKAKSST
KTAAAKKPAK PAAKKSAGKA NG
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