| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2181 |
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| Symbol | |
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| ID | 3969163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2374667 |
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| End bp | 2376262 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925289 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_532054 |
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| Protein GI | 90423684 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATA CCACCGCATC CCCGGCCGCC GCCGGCGCGC CGCCGGCCCC GCCGGTGGCG
TCGGACCACA TCGCGCCGAT GCGGCTGTTG GCGTTCCTGA TCATGGTGTT CGGGATGTTC
ATGGCGATCC TGGACATCCA GATCGTCTCG GCCTCGCTGT CGGACATCCA GGCCGGCTTG
TCGGCGAGCT CCAGCGAAAT CTCCTGGGTG CAAACCGCCT ATCTGATCGC CGAAGTGATC
GCGATTCCGC TGTCGGGGTT TCTGTCGCGG GCGCTCGGCA CCCGCTATCT GTTCGCGATC
TCGGCGGCGG GCTTCACCGG CGCCAGCCTG ATGTGCGGCT TCACCTCGTC GATCGAGCAG
ATGATCCTGT GGCGGGCGAT CCAAGGCTTC GTCGGCGCCG GCATGATCCC CACGGTGTTC
GCCTCGGCCT ACACGGTGTT TCCGCGCAGC AAGTTCCACA TCGTTGGACC CATCATCGGG
CTGGTGGCGA CGCTGGCGCC GACGGTGGGG CCGACCATCG GCGGCTACAT CACCGACCTG
ATGTCGTGGC ATTGGCTGTT CTTCATCAAC GTGGTTCCCG GCATCGGCAT CACTATCGGC
GTATTGCTGC TGGTCGATTT CGACGAGCCG CATTTCGCAC TGCTCGATCA TTTCGACTGG
TGGGGGCTGG CCTTCATGGG CGGCTTCCTC GGCTCGCTGG AATACGTGCT GGAGGAGGGG
CCGCGCAACG ACTGGTTCCA CGACGATTCG ATCGCGACCT TCGCGGTGAT CTGCGTGCTG
TCGGCGGTGG CGTTTTTCTG GCGGGTGCTG ACCGCGCACG AGCCGATCGT CGACATCAAG
ACCTTCACCA ACCGCAATTT CGGCCTCGGC TGCATGTTCG CCTTCGTGGT CGGCATCGGG
CTGTACGGCC TGACCTATAT CTATCCGCGC TATCTCGCCG AGGTGCGCGG TTACAGCGCG
CTGATGATCG GCGAGACCAT GTTCATTTCC GGCGTGGCGA TGTTCGTGTC GGCGCCGATC
GTCGGCCGGC TGATGCAGAA GGTCGACATG CGGCTGATGA TCGCGGTGGG CATGCTGCTG
TTCGCCTTCG GCACCTGGCA GATGACTTGG ATGACGCGGG ACTACGATTT CAATGAATTG
CTGTGGCCGC AGATCTTTCG CGGCGTCGGC ATGATGCTGG CGATGGTGCC GGTCAATACC
GTGGCGCTGG GCACGCTGGC GCCGGCGCGG CTGAAGAACG CCTCCGGGCT GTTCAACCTG
ATGCGCAATC TCGGCGGCGC GGTCGGGCTC GCCGCGCTCA ACACCGCGCT CGACGACCGC
ACCGATTTTC ACATCTCGCG GCTGCACGAC AAGGTGACCT GGGGCAACGC CCAGGCGGTC
GATCTGCTCC ACAGCTTCAC CCAGCGCTTC CAGGGGCTCG GCGACGCCTC GATGATGGCG
ATGAAGCAGC TCAACCAGAT CGTGCACCGC CAGGCCGTGG TGATGAGCTT CGCCGATGCG
TTCCTGCTGA TGACGGTGCT CTATGTCGGG CTCAGCACGC TGGTGGTGCT GTTGGCGAAG
CCAGGCAATC CGATGGACAC GCCGGACGCG CATTGA
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| Protein sequence | MSDTTASPAA AGAPPAPPVA SDHIAPMRLL AFLIMVFGMF MAILDIQIVS ASLSDIQAGL
SASSSEISWV QTAYLIAEVI AIPLSGFLSR ALGTRYLFAI SAAGFTGASL MCGFTSSIEQ
MILWRAIQGF VGAGMIPTVF ASAYTVFPRS KFHIVGPIIG LVATLAPTVG PTIGGYITDL
MSWHWLFFIN VVPGIGITIG VLLLVDFDEP HFALLDHFDW WGLAFMGGFL GSLEYVLEEG
PRNDWFHDDS IATFAVICVL SAVAFFWRVL TAHEPIVDIK TFTNRNFGLG CMFAFVVGIG
LYGLTYIYPR YLAEVRGYSA LMIGETMFIS GVAMFVSAPI VGRLMQKVDM RLMIAVGMLL
FAFGTWQMTW MTRDYDFNEL LWPQIFRGVG MMLAMVPVNT VALGTLAPAR LKNASGLFNL
MRNLGGAVGL AALNTALDDR TDFHISRLHD KVTWGNAQAV DLLHSFTQRF QGLGDASMMA
MKQLNQIVHR QAVVMSFADA FLLMTVLYVG LSTLVVLLAK PGNPMDTPDA H
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