| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2166 |
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| Symbol | |
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| ID | 3971987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2358072 |
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| End bp | 2359112 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925274 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_532039 |
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| Protein GI | 90423669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.402403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAGA CCACGCAGTC TAAACGCGGG CCGTTGCCCG TTGATCTCCG CACAAATGCG
CCGATTTCGG TGATCGGCGC CGGCATTGCC GGGGCCTGGC AGGCCTTGAT GCTGGCCCGC
GCCGGACGCG ACGTGACGCT CTACGAGAGC GGCGATTCCG AAATGACCCA GGCCACCAGC
CATTGGGCCG GCGGCATGCT GGCGCCGTGG TGCGAGGCCG AATCGGCCGA GCCGGTGATC
AGCCGGATCG GCATGCGCTC GCTCGATATC TGGCGCGAGG AATTCCCCGA GACGCCGTTC
AACGGCTCCT TGGTGGTGTC GCATCCGCGC GACCGCGCCG ACTACGAGCG CTTCGCCAAA
TTGACCACCG GGCATCAGCG GCTCGACGCC AAGGGCGTCG CCGAACTGGA GCCGGCGCTG
GAAGGCCGCT TCCGCGAAGG CCTGTTCTTC GCCGACGAAG GCCATGTCGA GCCGCGCGTG
GTGCTCGCCA AATTGCACGA ACGGCTGATC GAGGCCGGCG GAACTATTCA CTTCATGTCG
GCGCAGAATC CCGACGAGCT CGACGGCGTG GTGATCGATT GCCGCGGACT GTCCGCGCGC
GATGCCGCCC CCGAACTGCG CGGCGTCAAG GGCGAGATGA TCGTTATCGA GTCCAAGGAC
GTGCAATTGT CGCGCCCGGT GCGGCTGATG CATCCGCGCT GGCCGGTCTA TGTGATTCCG
CGCCCCGACA ACGTGTTCAT GGTCGGCGCC ACCACCATCG AGAGCGAGGA CGAGGGCGTC
AGCGTCCGCT CGGCGCTGGA ACTGTTGACC GCGGCCTACG CGCTGCATCC GGCGTTCGGT
GAGGCGCGGA TTCTGGAATT CGGTTCCGGT CTGCGCCCGG CGTTCCCGGA CAATCTGCCG
CGGATCTCGC TCGGCAACGG CCGCATCGCG GTCAATGGCC TGTATCGCCA CGGCTTCCTG
CTGTCGCCGG CGCTCGCCGA GATGACGCTG GCCTATGTGC AGCGCGGGGT CATCAACAAC
GAGGTGATGC AATGCGTGTG A
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| Protein sequence | MYQTTQSKRG PLPVDLRTNA PISVIGAGIA GAWQALMLAR AGRDVTLYES GDSEMTQATS
HWAGGMLAPW CEAESAEPVI SRIGMRSLDI WREEFPETPF NGSLVVSHPR DRADYERFAK
LTTGHQRLDA KGVAELEPAL EGRFREGLFF ADEGHVEPRV VLAKLHERLI EAGGTIHFMS
AQNPDELDGV VIDCRGLSAR DAAPELRGVK GEMIVIESKD VQLSRPVRLM HPRWPVYVIP
RPDNVFMVGA TTIESEDEGV SVRSALELLT AAYALHPAFG EARILEFGSG LRPAFPDNLP
RISLGNGRIA VNGLYRHGFL LSPALAEMTL AYVQRGVINN EVMQCV
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