| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2137 |
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| Symbol | |
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| ID | 3972424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2334235 |
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| End bp | 2334819 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925245 |
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| Product | hypothetical protein |
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| Protein accession | YP_532010 |
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| Protein GI | 90423640 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2862] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000987674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00718349 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCATGA CGCCCGAAAC GCCGTTGCCG CCGAAAGGGA TGCGGCTGCG ACCGATCCCG
ATGCTGATCT TCGGCTCGCG CTGGCTGCAG CTGCCGCTCT ATGTCGGGCT GATCGTGGCG
CAGGGCGTCT ATGTCGTGCT GTTCTTGAAG GAATTGTGGC ATCTGTTCGC GCACGCCTTC
GATTTCAGCG AACAGCAGAT CATGCTGGCG GTGCTCGGGC TGATCGACGT GGTGATGATC
TCCAACCTCT TGGTGATGGT GATCGTCGGC GGCTACGAGA CCTTCGTGTC GCGGCTCAAC
CTGGCGGGCC ATCCGGACGA GCCGGAATGG CTCAGCCACG TCAACGCCAG CGTCTTGAAG
ATCAAGTTGG CGATGGCGAT CATCGGCATC TCCTCGATCC ATCTGCTGCG CACCTTCATC
GAAGCCGGCG CGCTGGGCTC GGCGCGCACC GGCAACTACA CCGAGACCGG GGTGATGTGG
CAGACCATCA TCCACACCGT GTTCATCCTG TCGGCGATCG GCATCGCCTA TGTCGACAAA
TTGTCCAACG ACGCCACCGA AGCCGCCAAG CACGCCGCGC ATTGA
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| Protein sequence | MSMTPETPLP PKGMRLRPIP MLIFGSRWLQ LPLYVGLIVA QGVYVVLFLK ELWHLFAHAF
DFSEQQIMLA VLGLIDVVMI SNLLVMVIVG GYETFVSRLN LAGHPDEPEW LSHVNASVLK
IKLAMAIIGI SSIHLLRTFI EAGALGSART GNYTETGVMW QTIIHTVFIL SAIGIAYVDK
LSNDATEAAK HAAH
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