Gene RPC_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2124 
Symbol 
ID3973333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2324117 
End bp2325292 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content62% 
IMG OID637925232 
Producthypothetical protein 
Protein accessionYP_531997 
Protein GI90423627 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.466092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0154138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC AATTTTTCAC ATCGCTGCGC GACGCGCAGG TCCCGGTGAC GCTGCGCGAG 
TACCTCACGC TGATGGAGGC GCTCGACGCC GACCTCGCCG GGCAGAGCGT GGAGAATTTC
TACTATCTGT CGCGCGCCAC CTTGGTGAAG GACGAGCGCA ATCTCGACAA GTTCGACCGG
GTGTTCGGCA CCGTGTTCAA GGGGCTGGAG AACCTGCTGG ACGCCATGGA GAAGGCGGAG
ATTCCCGCCG AATGGCTGAA GAAGCTGGCG GAGAAATATC TCACCGAAGA CGAGAAGAAA
CAGATCGAGG CGTTGGGCTG GGACAAGCTG ATGGAGACCC TTCGCGAGCG CCTGAAGGAA
CAGAAGGAAC GCCACCAAGG CGGCAACAAA TGGATCGGCA CCGCCGGGAC CTCGCCGTTC
GGCGCCGAGG GCTACAATCC GGAAGGCGTG CGGATCGGCC AGGACAAGAG CCGCCATCAG
CGCGCGGTCA AGGTGTGGGA CAAGCGCGAG TTCAAGGATC TCGACGGCAA TGTCGAGCTC
GGCATCCGCA ACATCAAGGT GGCGCTGCGC CGTCTGCGCA AATTCGCCCG CACCGGCGCG
CCCGACGAAC TCGATCTCGA CACCACCATC AAGCAGACCG CCAACCACGG CTATCTCGAC
GTGCATATGC GCCCGGAGCG GCGCAACGCC GTCAAGGTGC TGGTGTTCTT CGACATCGGC
GGCTCGATGG ATTCCCACGT CTCGCAGGTC GAGGAATTGT TCTCGGCGGC GAAGGCCGAA
TTCAAGCACA TGGAATATTT CTACTTCCAC AATTGCCTCT ACGAAGGCGT CTGGAAAGAG
AACCGCCGCC GCTTCACCGA CCGCACGCCC ACCTGGGACG TGCTGCACAA ATATCCGCAC
GACTACAAGG TGGTGTTCGT CGGCGACGCC GCGATGTCGA GTTATGAGCT GATGATGCCG
GGCGGTTCGG TCGAGCACAT CAACGAGGAG CCCGGCGCGC TCTGGCTGGA GCGCGTCACC
CGCACCTATC CGCATGCGGT GTGGCTCAAT CCGGTGGCGC AGCGGCATTG GGACTATTCG
GAATCCACCA AGCAGATCCG TCGGCTGTTC TCCGAGCGGA TGTATCCCTT GACGCTGGAG
GGCTTGGAGG CCGCGATGAA GGAATTGGTG CGGTGA
 
Protein sequence
MFLQFFTSLR DAQVPVTLRE YLTLMEALDA DLAGQSVENF YYLSRATLVK DERNLDKFDR 
VFGTVFKGLE NLLDAMEKAE IPAEWLKKLA EKYLTEDEKK QIEALGWDKL METLRERLKE
QKERHQGGNK WIGTAGTSPF GAEGYNPEGV RIGQDKSRHQ RAVKVWDKRE FKDLDGNVEL
GIRNIKVALR RLRKFARTGA PDELDLDTTI KQTANHGYLD VHMRPERRNA VKVLVFFDIG
GSMDSHVSQV EELFSAAKAE FKHMEYFYFH NCLYEGVWKE NRRRFTDRTP TWDVLHKYPH
DYKVVFVGDA AMSSYELMMP GGSVEHINEE PGALWLERVT RTYPHAVWLN PVAQRHWDYS
ESTKQIRRLF SERMYPLTLE GLEAAMKELV R