Gene RPC_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2102 
Symbol 
ID3973658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2302601 
End bp2304493 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content64% 
IMG OID637925210 
ProductK+ potassium transporter 
Protein accessionYP_531975 
Protein GI90423605 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.710822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA CCAGCGCCGC GTCCACCGAC GCACCTCCGA CAACAGGCTT CTGGGCTTTG 
ACGCTCGGCG GCGTCGGCGT GGTGTTCGGC GATATCGGAA CCTCGCCGCT TTATGCCTTT
CGCGAGGCGG TGCATGTCGC CGCGGAAGGC GCCCAGGTCA CCCGGGTCAT CGTGCTCGGC
GTGCTGTCGT TGATCCTGTG GTCGCTGTTC ATCGTGGTCA CGGCGAAATA CGTGCTGCTG
CTGCTGCGCG CCGACAACAA CGGCGAGGGC GGCACGCTGT CGTTGATGGC GCTGGGGCAG
CGCGCGATCG GGCGCCGCAG CGTTTTCCTG ATGAGCCTCG GGGTGATCGG CGCCTCGATG
TTCATCGGCG ATTCCATGAT CACGCCGGCG ATTTCGGTGC TGTCGGCCGT CGAAGGCTTG
AAGATCGCCG CGCCGGCGCT CGAACATTAC GTGGTGCCGC TGACGGTCGG CATTCTGGTG
GTGCTGTTCG CATTTCAGCG CTGGGGCACC GCGCGGGTCG CCTCGGCGTT CGGCCCGGTG
ATGATCGTCT GGTTCAGCAC GCTGGCGGTG ATGGGGCTGA TCCACATCAA CGACGATCCG
TCGGTGCTGG CGGCGATCAA TCCTTGGCAC GCGGTGCACT TCATGTTGTC GCACGGCATG
GTCGGGCTGG TGACGATCGG AGCGGTGTTT CTCGCGGTCA CCGGCGGCGA GGCGCTGTAT
GCCGACCTCG GCCATTTCGG CCGCAAGCCG ATCCAGACCG GCTGGCTGTT TTTCGTGCTG
CCGTCGCTGC TGATCAACTA CTTCGGCCAA GGCGCGCTGG TGCTGTCGCA TCCTGAGGCC
GTCGAGAACA CCTTCTATCG CATGGTGCCG GAGAGTTTTC TGGTGCCGTT GATCGTGCTC
GCCACCGCCG CCACCGTGAT CGCCAGCCAG GCGGTGATCA CCGGGGCGTT TTCCTTGATC
AGCCAGGCGG TGCAGCTCGG ATTGTTGCCG CGCTTCGAGG TCCGCTACAC CTCGGAGACC
CACGCCGGCC AGATCTATCT GCCGCGGGTC AACATGCTGC TGTTGATCGG CGTCTTGATG
CTGGTGCTGC TGTTCCGCAA TTCCAGCGGA CTGGCCTCGG CCTATGGCAT CGCGGTGTCC
ACCACCATGG TGGCGGACGG CGTGATGGGC TTCGTGGTGA TCTGGAAATT GTGGGGCTGG
CGCCCGGCCG CCGCCGCCGC GTTGATCTTT CCGTTCGTCG CCGTCGACGC GATCTTCTTC
AGCGCCAATC TGCTGAAGCT TCTGGAAGGC GCCTGGGTGC CGCTGCTGTT CGGCCTGTTG
ATGGCGACGC TGATCTGGGT CTGGCGTCGC GGCTCGGCGA TGCTGATCCT GAAGACCCGT
CGCACCGAGG TGCCTTTGAA CGACCTGATC CAGAGTCTGG AGAAGCGTCC GCCGCACATC
GTCAAGGGCA CCGCGGTGTT TCTCACCAGC GATCCGGAAT ATGTGCCGAC GGCGCTGCTG
CACAATCTCA AGCACAACAA GGTGCTGCAC GAGCACAACG TGATCCTGAC GATCCAGACC
GCGCAGACCC CGCGGGTCGA CCCGGCCGAG CGGGTCACGA TGGAGAACAT CAGCGACAAA
TTCTCCAAGG TCCGGCTGCG GTTCGGCTAC ATGGAATCCC CCAATGTGCC GAAGGCGCTG
GTGATCGCCC GCAAGCTCGG CTGGCAATTC GACATCATGT CGACGTCGTT CTTCGTGTCG
CGGCGCTCGC TGAAGCCTGC CGCGCAATCC GGCCTGCCGC GCTGGCAGAA CCACCTGTTC
ATCGCGCTCA GTCGCTCGGC CAACGACGCC ACCGACTATT TCCAAATCCC CACCGGCCGC
GTGGTCGAGG TCGGCACCCA GGTGACGATC TGA
 
Protein sequence
MALTSAASTD APPTTGFWAL TLGGVGVVFG DIGTSPLYAF REAVHVAAEG AQVTRVIVLG 
VLSLILWSLF IVVTAKYVLL LLRADNNGEG GTLSLMALGQ RAIGRRSVFL MSLGVIGASM
FIGDSMITPA ISVLSAVEGL KIAAPALEHY VVPLTVGILV VLFAFQRWGT ARVASAFGPV
MIVWFSTLAV MGLIHINDDP SVLAAINPWH AVHFMLSHGM VGLVTIGAVF LAVTGGEALY
ADLGHFGRKP IQTGWLFFVL PSLLINYFGQ GALVLSHPEA VENTFYRMVP ESFLVPLIVL
ATAATVIASQ AVITGAFSLI SQAVQLGLLP RFEVRYTSET HAGQIYLPRV NMLLLIGVLM
LVLLFRNSSG LASAYGIAVS TTMVADGVMG FVVIWKLWGW RPAAAAALIF PFVAVDAIFF
SANLLKLLEG AWVPLLFGLL MATLIWVWRR GSAMLILKTR RTEVPLNDLI QSLEKRPPHI
VKGTAVFLTS DPEYVPTALL HNLKHNKVLH EHNVILTIQT AQTPRVDPAE RVTMENISDK
FSKVRLRFGY MESPNVPKAL VIARKLGWQF DIMSTSFFVS RRSLKPAAQS GLPRWQNHLF
IALSRSANDA TDYFQIPTGR VVEVGTQVTI