Gene RPC_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2077 
Symbol 
ID3971842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2273732 
End bp2274253 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID637925185 
Producthypothetical protein 
Protein accessionYP_531950 
Protein GI90423580 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.759836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.201615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATT TTGTCAACGC GCTGCTTGCG GCCGGCCTTG CGTTCGGGTT GTCGCTGTCG 
GGCGCTTCCG CTCAGGCGCC GGCGCCGGCA CCGCTGAAGC CGGCCTCGCC GGCGGCGGTC
GCCGCGGCCA AGGAAATTCT GACGATGAAG AACGTCAGCG CGATGTACGC CGCCGCGGTG
CCGAACATCG TTCAGCGCAC CAAGGAAACC CTGCTGCAGA ACAACCTCAA CTATCAGAAA
GACCTGAACG AGGTTGCGCT GGTGGTGGCG AAGGCGATGG CGGGTCGCGA GAAGGACATC
GGCGAGCAGA TGGCCAAGAT CTACGCCAGC GATTTCACCG AGCAGGAGCT GAAGGATCTC
GTCACCTTCT ACAAGTCCCC GCTCGGCCAG AAGCTGTTGG CGCAGGAGCC GAAGACCATT
TCGGCCAGCA TGCAGTACAT GAATCAGTGG GCGCAGAGCT TTGCCGAAGA GGTCAACGGC
CAATTCCGCG CCGAGATGCG CAAGCGCGGC AAGGAAATCT GA
 
Protein sequence
MRYFVNALLA AGLAFGLSLS GASAQAPAPA PLKPASPAAV AAAKEILTMK NVSAMYAAAV 
PNIVQRTKET LLQNNLNYQK DLNEVALVVA KAMAGREKDI GEQMAKIYAS DFTEQELKDL
VTFYKSPLGQ KLLAQEPKTI SASMQYMNQW AQSFAEEVNG QFRAEMRKRG KEI