Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2070 |
Symbol | |
ID | 3974028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2266391 |
End bp | 2267500 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637925178 |
Product | transposase, IS4 |
Protein accession | YP_531943 |
Protein GI | 90423573 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.361734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAGC CGATGGATCG ATTTGCGGAG TGCTTCGAAG ACCTGCCCGA CCCGCGGGCG GGCAATGCGT TGCACGATCT GACCGAGATC TTGTTCATTG CCCTGATGGC GACGCTGTGC GGGGCGACCA GTTGCACCGA CATGGCGCTG TTTGCGCGGA TGAAGGCCTA TCTTTGGCGG GATGTGCTGG TCCTGAAGAA CGGCCTTCCG AGCCACGACA CGTTCAGTCG GGTGTTCCGC ATGCTGGACC CGGAGGCGTT CGAGAAGGCG TTCCAACGCT TCATGAAAGC CTTTGCCAAA GGCGCCAAGA TCAAGCCGCC GAAAGGGGTG ATCGCCCTCG ACGGCAAGGC GCTGCGGCGC GGCTACGAAA GCGGCAGAAG CCACATGCCG CCCGTGATGG TGACGGCCTG GGCGGCGCAG ACCCGCATGG CGCTGGCCAA TGTGCAGGCC CCGAACAACA ACGAAGCCGC CGGTGCCTTG CAACTGATCG AACTTCTGCA GCTCAAAGGC TGCGTCGTGA CGGCCGATGC GCTGCATTGC CATCGTGGCA TGGCCGAAGC GATCAAGGCC CGGGGCGGCG ATTATGTGCT GGCCGTGAAG GACAACCAGC CAGCGCTGAT GCGGGATGCG AAGGCGGCAA TCCGCGCCGC CACGCGCCAG GGCAAGCCAT CGACGATCAC CGTCGATGCC GGTCATGGAC GCAAGGAAAA GCGCCGTGCT GTCGTCGCCG CTGTCCCGCA GATGGCGCAA GACCACGACT TTGCCGGGCT CAAAGCGGTG GCCAGGATCA CCAGCAAGCG CGGCACCGAC AAGACCGTCG AGCGTTACTT TCTGATGAGC CAGGCCTATC CCCCCAAAGA CGTCCTGCGC ATCGTCCGGA CCCACTGGAC CATCGAAAAC AGCCTGCATT GGCCGCTCGA CGTCGTGCTC GACGAGGACT TGGCGCGCAA TCGCAAGGAC AACGCCCCCG CCAACCTCGC CGTGCTCAGA CGCCTGGCCC TCAACGTCGC AAGGGCACAT CCAGACAACA CCACATCGCT GCGTGGAAAG CTGAAACGTG CAGGATGGAA CGATACGTTC CTCTTCGAAC TCATCCAACA CATGCGATAG
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Protein sequence | MEQPMDRFAE CFEDLPDPRA GNALHDLTEI LFIALMATLC GATSCTDMAL FARMKAYLWR DVLVLKNGLP SHDTFSRVFR MLDPEAFEKA FQRFMKAFAK GAKIKPPKGV IALDGKALRR GYESGRSHMP PVMVTAWAAQ TRMALANVQA PNNNEAAGAL QLIELLQLKG CVVTADALHC HRGMAEAIKA RGGDYVLAVK DNQPALMRDA KAAIRAATRQ GKPSTITVDA GHGRKEKRRA VVAAVPQMAQ DHDFAGLKAV ARITSKRGTD KTVERYFLMS QAYPPKDVLR IVRTHWTIEN SLHWPLDVVL DEDLARNRKD NAPANLAVLR RLALNVARAH PDNTTSLRGK LKRAGWNDTF LFELIQHMR
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