| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2067 |
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| Symbol | |
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| ID | 3974025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2262994 |
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| End bp | 2264082 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925175 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_531940 |
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| Protein GI | 90423570 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.270219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0802358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GTGACTTTTT GAAAGTATCC GCAACCGGCG CTGCGGTCGC CGCGGTGGCG
TCGCCGGCGA TTGCGCAGTC CTCGCCGGAA ATCAAGTGGC GGCTGACCTC GAGTTTCCCG
AAGTCGCTCG ACACCATCTA TGGCGGCGCG GAATATCTCG CCAAGCAAGT CGCCGAGATG
ACCGACAACA AGTTCCAGAT CCAGGTGTTC GCGGCCGGCG AAATCGTGCC CGGCCTGCAG
GCGCTCGACG CCACTTCGAA CAACACCGTC GAGATGAGCC ACACCGTGTC CTATTACTAC
GTCGGCAAGG ACCCGACCTT CGCGGTCTAT GCGTCGGTGC CGTTCGGGCT GAACGCGCGG
CAGCAGAATT CCTGGTGGTA TCAGGGCGGC GGCATGGAGC TCGGCAACGA GTTCTACAAG
AAATACGGCG TGATCGGATT TCCCTGCGGC AACACCGGGA CCCAGATGGG CGGCTGGTTC
CGCAAGGAGA TCAAGACCGT GGCCGATCTG TCCGGGCTGA AATTCCGCAT CGGCGGCATC
GCCGGCCAGG TGCTGCAGAA GCTCGGCGTG GTGCCGCAGC AGATCGCCGG CGGCGACATC
TATCCGGCGC TGGAAAAGGG CACCATCGAC GCGGCCGAGT GGGTCGGCCC CTATGACGAC
GAGAAGCTCG GCTTCCAGAA GGTCGCGAAG TACTACTACT ATCCGGGCTT CTGGGAAGGC
GGTCCGACCG TGCACGCCTT CGCCAATCTG GAAAAGTACA ACTCGCTGCC GAAGAGCTAT
CAGTCGATCC TGGCCAACGC CGCGCAGGCC ACCAACAGCT GGATGGCGGC GCGCTACGAC
ATGCAGAATC CGCCGGCGCT GAAGCGCCTG GTGGCAGGCG GCACGCAGCT GCGGCCGTTC
TCCAACGAGG TGCTGGACGC CTGCCTGAAG GCGACCAACG AATTGTGGGG CGAAATCTCC
GCCAAGAACG CCGACTTCAA GAAGGGCATC GACGCGATGC AGGCCTACCG CTCCGATCAG
TATCTGTGGT GGCAGGTCGC CGAATACACC TTCGACAGCT TCATGATCCG CTCGCGCACC
CGCGGCTGA
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| Protein sequence | MKRRDFLKVS ATGAAVAAVA SPAIAQSSPE IKWRLTSSFP KSLDTIYGGA EYLAKQVAEM
TDNKFQIQVF AAGEIVPGLQ ALDATSNNTV EMSHTVSYYY VGKDPTFAVY ASVPFGLNAR
QQNSWWYQGG GMELGNEFYK KYGVIGFPCG NTGTQMGGWF RKEIKTVADL SGLKFRIGGI
AGQVLQKLGV VPQQIAGGDI YPALEKGTID AAEWVGPYDD EKLGFQKVAK YYYYPGFWEG
GPTVHAFANL EKYNSLPKSY QSILANAAQA TNSWMAARYD MQNPPALKRL VAGGTQLRPF
SNEVLDACLK ATNELWGEIS AKNADFKKGI DAMQAYRSDQ YLWWQVAEYT FDSFMIRSRT
RG
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