| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2034 |
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| Symbol | |
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| ID | 3973934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2215841 |
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| End bp | 2216629 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925143 |
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| Product | peptidase S49 |
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| Protein accession | YP_531908 |
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| Protein GI | 90423538 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.12066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGC GCCGGCAACG ACCCGCGGCG GGACCGCAAC AGAAGCCGGT GGCCGTGCTG
CGGCTGCGGG GCGAGATCGC GGTGTCGTCG GCGATGATCC AGGACCTGCT CAATGTGCTG
CCACAGCTGA CGCCGCAGGA ACACGCCGCG CTGATCATCA CGCTAGAAAC CGCCGGCGGC
ACTTTGACCT GCGCCGAGAA CATCATGGGC TGGGTCGACC ACCTCTATCG CAGGTTGAGC
TGCCCGGTGA TCGCCGTCAT AGAGGAAAGA TGCCTGTCGG CCGGGCTGGC GATCGCCGCC
TGCTGCGATC ACGTCATCGC GCAACCGAGC GCCATGATCG GCGCGTTCGG CGTGATGATG
ACATGGCCCG GGGAGAACCG GCTGCGGGCG CAACTCGGGT TGCTCGCCAC CGTCTACAAG
ACCACTGCGC TGAAGGATTT TGGCTCGCCG CATCGGGCTC CCACGGCGGA GGACGATGCC
GCGATCCATT CGGTGCTGCA GGACATCCAC GGCCAGTTTG CCGAACTGAT CCGCGACCGG
CGTGGGATCG GCGGCGGCGA GATCGACGAG ATCTTCGATG GCCGATTGAT CACCGGCCGC
CGCGCGCTGG AGATCGGGCT GGTCGACCAA TTGGGAGGAT TCGAAACGGC CCTGCAATGG
CTGAACGCGA ATGGCGTCAG CGTGGGCGAG CCGCCCCACA TGCTGATATT TCTCGGCAAC
GCCAGCCCGA GCGGCCAGTC CTCGGGTGGG GTGCTGGAGT TGCTCAGGAC GCTGGTGCAT
ACCTCATGA
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| Protein sequence | MMLRRQRPAA GPQQKPVAVL RLRGEIAVSS AMIQDLLNVL PQLTPQEHAA LIITLETAGG
TLTCAENIMG WVDHLYRRLS CPVIAVIEER CLSAGLAIAA CCDHVIAQPS AMIGAFGVMM
TWPGENRLRA QLGLLATVYK TTALKDFGSP HRAPTAEDDA AIHSVLQDIH GQFAELIRDR
RGIGGGEIDE IFDGRLITGR RALEIGLVDQ LGGFETALQW LNANGVSVGE PPHMLIFLGN
ASPSGQSSGG VLELLRTLVH TS
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