| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2029 |
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| Symbol | |
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| ID | 3973929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2211679 |
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| End bp | 2212329 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925138 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_531903 |
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| Protein GI | 90423533 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAG TCTTGACACG GCGCGATGCG ACCAATCCGC TCTTCGACCA AATGTTCAGG
GCCCGCGCCA TCGTGCTGCG CGACCGGCTG GGCTGGTCCC TGAATGTCGT CGACGGCATG
GAGATCGACT ATTACGACAC GCAGGCCGAT CCGATCTATC TGGTGACGCT GGATGATTGC
GGTTTTTCGA CCGGCTCATT GCGGCTGCTG CGCGCCAACG GCCAGTGCAT GCTGGACAAC
GAGTTCCGTG ACTTCTTCGA TCCGCCGGTC GAGATCCAGA GCCCGCTGGC GTGGGAATGC
ACGCGGTTCT GCGTGCATCC GACCGTTCCG CCCGGCGCCG CCCATGCCGT CGCGGTCGAA
CTTCTCGCAG GGCTCTGCGA CCTGGCGCTG CGCTCCCGGA TCGACCGCAT TGTCGGCGTC
TACGACGCCG CGATGAGCAG GGTCTATCGC CGCATCGGAT GGTCGCCGGT CGTGCTGGCG
CGATCTCGGG CGGAGGTCGG ACATCTCTAT GCTGGGCGAT GGATGGTCAG CCCGCAGGTG
TCCCACGATC TCCAGCAACG GGTCCGCAAG GCACAGCTCG CTCGGGGCGA TGCGCTGTCT
AATCGGCCGG TCCCGGATGA TCGGCCGGCG CTGGGCGGGC TCACGCCGTG A
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| Protein sequence | MLKVLTRRDA TNPLFDQMFR ARAIVLRDRL GWSLNVVDGM EIDYYDTQAD PIYLVTLDDC
GFSTGSLRLL RANGQCMLDN EFRDFFDPPV EIQSPLAWEC TRFCVHPTVP PGAAHAVAVE
LLAGLCDLAL RSRIDRIVGV YDAAMSRVYR RIGWSPVVLA RSRAEVGHLY AGRWMVSPQV
SHDLQQRVRK AQLARGDALS NRPVPDDRPA LGGLTP
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