Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1981 |
Symbol | |
ID | 3973772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2156387 |
End bp | 2156860 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925092 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_531857 |
Protein GI | 90423487 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0594702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGA CGTTGAAAGA CCCGCACGAC GGCGACCTTG CCGAACTGTC CGAAATCAAC GTCACGCCGT TCATCGACGT GATGCTGGTG CTGCTGATCA TCTTCATGGT GGCGGCGCCG TTGTCGACGG TGGATGTCGG CGTCGATCTG CCGACCTCCA CCGCGCAGCC GCAGCCGCGG CCCGACAAGC CGGTGTATCT CACCGTCAAG CCGGACCTGT CGCTGGCGCT CGGCAACCAG GATATCGCCC GCGAGGCGTT GCAGGCCGCG CTCGACGGCC AGACGGCGAG CGATCGCGAG CAACGCGTGT TCCTGCGCGC CGACGGGGTG GTGCCGTATC GCGAACTGAT GGCGGTGATG AACCTGCTGC GCGGTGCCGG CTATCTCAAG GTGGCGCTGG TTGCGCTGGA AGACCTTGGG GCGGGCGGTG CCATTGCCGC CACGCCGGCG ATGCCGCAAG CGCCGCGGCC ATGA
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Protein sequence | MAVTLKDPHD GDLAELSEIN VTPFIDVMLV LLIIFMVAAP LSTVDVGVDL PTSTAQPQPR PDKPVYLTVK PDLSLALGNQ DIAREALQAA LDGQTASDRE QRVFLRADGV VPYRELMAVM NLLRGAGYLK VALVALEDLG AGGAIAATPA MPQAPRP
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